6FZW
Crystal structure of the metalloproteinase enhancer PCPE-1 bound to the procollagen C propeptide trimer (long)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D | d6fzwd1 | All beta proteins | CUB-like | Spermadhesin, CUB domain | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | COLFI | e6fzwA1 | A: a+b complex topology | X: Fibrinogen C-terminal domain-like (From Topology) | H: Fibrinogen C-terminal domain-like (From Topology) | T: Fibrinogen C-terminal domain-like | F: COLFI | ECOD (1.6) |
B | COLFI | e6fzwB1 | A: a+b complex topology | X: Fibrinogen C-terminal domain-like (From Topology) | H: Fibrinogen C-terminal domain-like (From Topology) | T: Fibrinogen C-terminal domain-like | F: COLFI | ECOD (1.6) |
C | COLFI | e6fzwC1 | A: a+b complex topology | X: Fibrinogen C-terminal domain-like (From Topology) | H: Fibrinogen C-terminal domain-like (From Topology) | T: Fibrinogen C-terminal domain-like | F: COLFI | ECOD (1.6) |
D | CUB | e6fzwD1 | A: beta sandwiches | X: jelly-roll | H: Spermadhesin, CUB domain (From Topology) | T: Spermadhesin, CUB domain | F: CUB | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.120.1000 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
B | 2.60.120.1000 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
C | 2.60.120.1000 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01410 | Fibrillar collagen C-terminal domain (COLFI) | Fibrillar collagen C-terminal domain | - | Family | |
PF00431 | CUB domain (CUB) | CUB domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008160 | Collagen triple helix repeat | Repeat | |
IPR000885 | Fibrillar collagen, C-terminal | Domain | |
IPR001007 | VWFC domain | Domain | |
IPR050149 | Collagen superfamily | Family | |
IPR050841 | Developmental metalloproteases and endocytic receptors | Family | |
IPR001134 | Netrin domain | Domain | |
IPR008993 | Tissue inhibitor of metalloproteinases-like, OB-fold | Homologous Superfamily | |
IPR035914 | Spermadhesin, CUB domain superfamily | Homologous Superfamily | |
IPR035814 | Procollagen C-endopeptidase enhancer, NTR domain | Domain | |
IPR000859 | CUB domain | Domain | |
IPR018933 | Netrin module, non-TIMP type | Domain |