Crystal structure of the Chp2 chromoshadow domain in complex with N-terminal domain of chromatin remodeler Mit1
External Resource: Annotation
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
B | SCOP2 Family | Chromo domain | 8095624 | 4000375 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Chromo domain-like | 8095625 | 3000161 | SCOP2 (2022-06-29) |
A | SCOP2B Superfamily | Chromo domain-like | 8095625 | 3000161 | SCOP2B (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
B | Chromo_shadow | e6ftoB1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: Chromo_shadow | ECOD (1.6) |
A | Chromo_shadow | e6ftoA1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: Chromo_shadow | ECOD (1.6) |
C | UNK_F_TYPE | e6ftoC1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: UNK_F_TYPE | ECOD (1.6) |
Chains | Accession | Name | Description | Comments | Source |
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| PF01393 | Chromo shadow domain (Chromo_shadow) | Chromo shadow domain | This domain is distantly related to Pfam:PF00385. This domain is always found in association with a chromo domain. | Domain |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|
| Chromo domain-containing protein 2 | | | |
| Chromatin remodeling factor mit1 | | | |
Chains | Accession | Name | Type |
---|
| IPR000953 | Chromo/chromo shadow domain | Domain |
| IPR023780 | Chromo domain | Domain |
| IPR016197 | Chromo-like domain superfamily | Homologous Superfamily |
| IPR008251 | Chromo shadow domain | Domain |
| IPR051219 | Heterochromatin-associated chromo domain-containing protein | Family |
| IPR000330 | SNF2, N-terminal | Domain |
| IPR001965 | Zinc finger, PHD-type | Domain |
| IPR016197 | Chromo-like domain superfamily | Homologous Superfamily |
| IPR049730 | SNF2/RAD5-like, C-terminal helicase domain | Domain |
| IPR019787 | Zinc finger, PHD-finger | Domain |
| IPR011011 | Zinc finger, FYVE/PHD-type | Homologous Superfamily |
| IPR019786 | Zinc finger, PHD-type, conserved site | Conserved Site |
| IPR038718 | SNF2-like, N-terminal domain superfamily | Homologous Superfamily |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
| IPR041299 | Chromatin remodeling factor Mit1, C-terminal Zn finger 1 | Domain |
| IPR001650 | Helicase, C-terminal domain-like | Domain |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain | Domain |
| IPR040934 | Mit1, C-terminal Zn finger 2 | Domain |