Annotations: 6F8L

Thermus thermophilus PilF ATPase (AMPPNP-bound form)

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
R [auth F]	OB_NTP_bind	e6f8lF1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
Q [auth E]	OB_NTP_bind	e6f8lE1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
P [auth D]	OB_NTP_bind	e6f8lD1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
O [auth C]	OB_NTP_bind	e6f8lC1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
N [auth B]	OB_NTP_bind	e6f8lB1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
M [auth A]	OB_NTP_bind	e6f8lA1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
L [auth R]	OB_NTP_bind	e6f8lR1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
K [auth Q]	OB_NTP_bind	e6f8lQ1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
J [auth P]	OB_NTP_bind	e6f8lP1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
I [auth O]	OB_NTP_bind	e6f8lO1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
H [auth N]	OB_NTP_bind	e6f8lN1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
G [auth M]	OB_NTP_bind	e6f8lM1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
F [auth I]	OB_NTP_bind	e6f8lI1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
E [auth H]	OB_NTP_bind	e6f8lH1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
D [auth L]	OB_NTP_bind	e6f8lL1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
C [auth K]	OB_NTP_bind	e6f8lK1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
B [auth J]	OB_NTP_bind	e6f8lJ1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
A [auth G]	OB_NTP_bind	e6f8lG1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth G], B [auth J], C [auth K], D [auth L], E [auth H], A [auth G], B [auth J], C [auth K], D [auth L], E [auth H], F [auth I], G [auth M], H [auth N], I [auth O], J [auth P], K [auth Q], L [auth R], M [auth A], N [auth B], O [auth C], P [auth D], Q [auth E], R [auth F]	PF05157	MshEN domain (MshEN)	MshEN domain	This domain is found at the N-terminus of the Type II secretion secretion system protein E (GspE) and type IV pilus extensin ATPase PilB and near the C-terminus of the glycosyltransferase NfrB. A variant of this domain, called MshEN, binds cyclic di- ...	This domain is found at the N-terminus of the Type II secretion secretion system protein E (GspE) and type IV pilus extensin ATPase PilB and near the C-terminus of the glycosyltransferase NfrB. A variant of this domain, called MshEN, binds cyclic di-GMP [4,6,7], which modulates the activity of the respective protein. The structure of this domain is now known [1,2,4].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth G], B [auth J], C [auth K], D [auth L], E [auth H], A [auth G], B [auth J], C [auth K], D [auth L], E [auth H], F [auth I], G [auth M], H [auth N], I [auth O], J [auth P], K [auth Q], L [auth R], M [auth A], N [auth B], O [auth C], P [auth D], Q [auth E], R [auth F]	Type IV pilus assembly protein PilF	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity cation binding metal ion binding	-	cell periphery cellular anatomical structure plasma membrane membrane intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth G], B [auth J], C [auth K], D [auth L], E [auth H], A [auth G], B [auth J], C [auth K], D [auth L], E [auth H], F [auth I], G [auth M], H [auth N], I [auth O], J [auth P], K [auth Q], L [auth R], M [auth A], N [auth B], O [auth C], P [auth D], Q [auth E], R [auth F]	IPR001482	Type II/IV secretion system domain	Domain
A [auth G], B [auth J], C [auth K], D [auth L], E [auth H], A [auth G], B [auth J], C [auth K], D [auth L], E [auth H], F [auth I], G [auth M], H [auth N], I [auth O], J [auth P], K [auth Q], L [auth R], M [auth A], N [auth B], O [auth C], P [auth D], Q [auth E], R [auth F]	IPR037257	Type II secretion system protein GspE, N-terminal superfamily	Homologous Superfamily
A [auth G], B [auth J], C [auth K], D [auth L], E [auth H], A [auth G], B [auth J], C [auth K], D [auth L], E [auth H], F [auth I], G [auth M], H [auth N], I [auth O], J [auth P], K [auth Q], L [auth R], M [auth A], N [auth B], O [auth C], P [auth D], Q [auth E], R [auth F]	IPR007831	Type II secretion system protein GspE, N-terminal	Domain
A [auth G], B [auth J], C [auth K], D [auth L], E [auth H], A [auth G], B [auth J], C [auth K], D [auth L], E [auth H], F [auth I], G [auth M], H [auth N], I [auth O], J [auth P], K [auth Q], L [auth R], M [auth A], N [auth B], O [auth C], P [auth D], Q [auth E], R [auth F]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

6F8L | pdb_00006f8l

Thermus thermophilus PilF ATPase (AMPPNP-bound form)

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage