6EPK
CRYSTAL STRUCTURE OF THE PRECURSOR MEMBRANE PROTEIN-ENVELOPE PROTEIN HETERODIMER FROM THE YELLOW FEVER VIRUS
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Flavi_glycop_C | e6epkA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Flavi_glycop_C | ECOD (1.6) |
A | Flavi_glycoprot | e6epkA1 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Flavi_glycoprot | ECOD (1.6) |
C [auth D] | Flavi_glycop_C | e6epkD2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Flavi_glycop_C | ECOD (1.6) |
C [auth D] | Flavi_glycoprot | e6epkD1 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Flavi_glycoprot | ECOD (1.6) |
B | Flavi_propep | e6epkB1 | A: beta sandwiches | X: HSP40/DnaJ peptide-binding domain (From Topology) | H: HSP40/DnaJ peptide-binding domain (From Topology) | T: HSP40/DnaJ peptide-binding domain | F: Flavi_propep | ECOD (1.6) |
D [auth E] | Flavi_propep | e6epkE1 | A: beta sandwiches | X: HSP40/DnaJ peptide-binding domain (From Topology) | H: HSP40/DnaJ peptide-binding domain (From Topology) | T: HSP40/DnaJ peptide-binding domain | F: Flavi_propep | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.98.10 | Mainly Beta | Sandwich | Tick-borne Encephalitis virus Glycoprotein | domain 1 | CATH (4.3.0) |
A | 3.30.67.10 | Alpha Beta | 2-Layer Sandwich | Viral Envelope Glycoprotein | domain 2 | CATH (4.3.0) |
A | 3.30.387.10 | Alpha Beta | 2-Layer Sandwich | Viral Envelope Glycoprotein | domain 3 | CATH (4.3.0) |
A | 2.60.40.350 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
C [auth D] | 2.60.98.10 | Mainly Beta | Sandwich | Tick-borne Encephalitis virus Glycoprotein | domain 1 | CATH (4.3.0) |
C [auth D] | 3.30.67.10 | Alpha Beta | 2-Layer Sandwich | Viral Envelope Glycoprotein | domain 2 | CATH (4.3.0) |
C [auth D] | 3.30.387.10 | Alpha Beta | 2-Layer Sandwich | Viral Envelope Glycoprotein | domain 3 | CATH (4.3.0) |
C [auth D] | 2.60.40.350 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth D] | PF00869 | Flavivirus glycoprotein, central and dimerisation domains (Flavi_glycoprot) | Flavivirus glycoprotein, central and dimerisation domains | - | Domain |
A, C [auth D] | PF02832 | Flavivirus glycoprotein, immunoglobulin-like domain (Flavi_glycop_C) | Flavivirus glycoprotein, immunoglobulin-like domain | - | Domain |
B, D [auth E] | PF01570 | Flavivirus polyprotein propeptide (Flavi_propep) | Flavivirus polyprotein propeptide | - | Family |