6EK2
CRYSTAL STRUCTURE OF HUMAN CD81 LARGE EXTRACELLULAR LOOP IN COMPLEX WITH SINGLE CHAIN FV FRAGMENT 10
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6ek2a1 | All alpha proteins | Tetraspanin | Tetraspanin | Tetraspanin | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d6ek2a2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d6ek2b_ | All alpha proteins | Tetraspanin | Tetraspanin | Tetraspanin | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C [auth H] | d6ek2h1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
D [auth I] | d6ek2i1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | Mouse (Mus musculus ) [TaxId: 10090 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e6ek2A1 | A: few secondary structure elements | X: Tetraspanin extracellular domain (From Topology) | H: Tetraspanin extracellular domain (From Topology) | T: Tetraspanin extracellular domain | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e6ek2B1 | A: few secondary structure elements | X: Tetraspanin extracellular domain (From Topology) | H: Tetraspanin extracellular domain (From Topology) | T: Tetraspanin extracellular domain | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth H] | PF07686 | e6ek2H1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
D [auth I] | PF07686 | e6ek2I1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.1450.10 | Mainly Alpha | Orthogonal Bundle | Cd81 Antigen, Extracellular Domain | Chain: A | CATH (4.3.0) |
B | 1.10.1450.10 | Mainly Alpha | Orthogonal Bundle | Cd81 Antigen, Extracellular Domain | Chain: A | CATH (4.3.0) |
C [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
D [auth I] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
C [auth H], D [auth I] | scFv 10 ,neutralizing ,anti-CD81 | SCFV-HEAVY-KAPPA | Mus musculus (house mouse) | IGHV5-4*02, IGHJ3*01, IGKV13-84*01, IGKJ1*01 | V-DOMAIN VH, V-DOMAIN V-KAPPA | IG | SCFV-HEAVY-KAPPA | IMGT (202428-2) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008952 | Tetraspanin, EC2 domain superfamily | Homologous Superfamily | |
IPR000301 | Tetraspanin, animals | Family | |
IPR018503 | Tetraspanin, conserved site | Conserved Site | |
IPR018499 | Tetraspanin/Peripherin | Family |