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 6EBQ | pdb_00006ebq

Crystal Structure of the Flavoprotein NrdI from Aerococcus urinae in Oxidized Form

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyFlavoprotein NrdI 8097745 4002063 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyFlavoproteins 8097746 3001217 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BOB_NTP_binde6ebqB1 A: alpha arraysX: L-aspartase middle domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: OB_NTP_bindECOD (v295.2)
AFlu_PB2_1ste6ebqA1 A: alpha arraysX: fingers domain in bacteriophage RB69-like DNA polymerase IH: fingers domain in bacteriophage RB69-like DNA polymerase IT: fingers domain in bacteriophage RB69-like DNA polymerase IF: Flu_PB2_1stECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.50.360 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Flavodoxin domainCATH (4.3.0)
A3.40.50.360 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Flavodoxin domainCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Protein NrdI - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR029039Flavoprotein-like superfamilyHomologous Superfamily
A, B
IPR004465Ribonucleotide reductase Class Ib, NrdIFamily
A, B
IPR020852Ribonucleotide reductase, class Ib, NrdI, bacterialFamily