6E4W
Structure of AMPK bound to activator
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Starch-binding domain-like | 8055091 | 3000816 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | AMPKBI-like | 8065233 | 3000446 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | CBS-domain pair | 8037383 | 3000123 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | CBS-domain pair | 8037384 | 3000123 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | AdenylateSensor_1 | e6e4wA2 | A: a+b two layers | X: TBP-like | H: Kinase associated domain 1, KA1 (From Topology) | T: Kinase associated domain 1, KA1 | F: AdenylateSensor_1 | ECOD (1.6) |
A | Pkinase_Tyr | e6e4wA1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: Pkinase_Tyr | ECOD (1.6) |
B | AMPK1_CBM | e6e4wB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: AMPK1_CBM | ECOD (1.6) |
B | AMPKBI | e6e4wB2 | A: a+b two layers | X: AMPKBI-like (From Topology) | H: AMPKBI-like (From Topology) | T: AMPKBI-like | F: AMPKBI | ECOD (1.6) |
C | IMPDH_2nd_1 | e6e4wC2 | A: a+b duplicates or obligate multimers | X: CBS-domain (From Topology) | H: CBS-domain (From Topology) | T: CBS-domain | F: IMPDH_2nd_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00069 | Protein kinase domain (Pkinase) | Protein kinase domain | - | Domain | |
PF16579 | Adenylate sensor of SNF1-like protein kinase (AdenylateSensor) | Adenylate sensor of SNF1-like protein kinase | AdenylateSensor is a family found at the C-terminus of SNF1-like protein kinases snf other protein-kinases [1]. | Domain | |
PF00571 | CBS domain (CBS) | CBS domain | CBS domains are small intracellular modules that pair together to form a stable globular domain [2]. This family represents a single CBS domain. Pairs of these domains have been termed a Bateman domain [6]. CBS domains have been shown to bind ligands ... | Domain |