6E4U
Structure of AMPK bound to activator
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Starch-binding domain-like | 8055091 | 3000816 | SCOP2B (2021-05-27) |
B | SCOP2B Superfamily | AMPKBI-like | 8065233 | 3000446 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | CBS-domain pair | 8037383 | 3000123 | SCOP2B (2021-05-27) |
C | SCOP2B Superfamily | CBS-domain pair | 8037384 | 3000123 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF16579 | e6e4uA1 | A: a+b two layers | X: TBP-like | H: Kinase associated domain 1, KA1 (From Topology) | T: Kinase associated domain 1, KA1 | F: PF16579 | ECOD (1.6) |
A | PF00069 | e6e4uA2 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: PF00069 | ECOD (1.6) |
B | PF16561 | e6e4uB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF16561 | ECOD (1.6) |
B | PF04739 | e6e4uB1 | A: a+b two layers | X: AMPKBI-like (From Topology) | H: AMPKBI-like (From Topology) | T: AMPKBI-like | F: PF04739 | ECOD (1.6) |
C | PF00571 | e6e4uC1 | A: a+b duplicates or obligate multimers | X: CBS-domain (From Topology) | H: CBS-domain (From Topology) | T: CBS-domain | F: PF00571 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00069 | Protein kinase domain (Pkinase) | Protein kinase domain | - | Domain | |
PF16579 | Adenylate sensor of SNF1-like protein kinase (AdenylateSensor) | Adenylate sensor of SNF1-like protein kinase | AdenylateSensor is a family found at the C-terminus of SNF1-like protein kinases snf other protein-kinases [1]. | Domain | |
PF16561 | Glycogen recognition site of AMP-activated protein kinase (AMPK1_CBM) | Glycogen recognition site of AMP-activated protein kinase | - | Family | |
PF00571 | CBS domain (CBS) | CBS domain | CBS domains are small intracellular modules that pair together to form a stable globular domain [2]. This family represents a single CBS domain. Pairs of these domains have been termed a Bateman domain [6]. CBS domains have been shown to bind ligands ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000719 | Protein kinase domain | Domain | |
IPR039137 | 5'-AMP-activated protein kinase alpha 1 catalytic subunit, C-terminal | Domain | |
IPR049020 | PRKAA1/2, autoinhibitory domain | Domain | |
IPR017441 | Protein kinase, ATP binding site | Binding Site | |
IPR032270 | AMPK, C-terminal adenylate sensor domain | Domain | |
IPR008271 | Serine/threonine-protein kinase, active site | Active Site | |
IPR028375 | KA1 domain/Ssp2, C-terminal | Homologous Superfamily | |
IPR028797 | PRKAA1, UBA-like autoinhibitory domain | Domain | |
IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily | |
IPR032640 | AMP-activated protein kinase, glycogen-binding domain | Domain | |
IPR037256 | ASC domain superfamily | Homologous Superfamily | |
IPR006828 | Association with the SNF1 complex (ASC) domain | Domain | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR014756 | Immunoglobulin E-set | Homologous Superfamily | |
IPR046342 | CBS domain superfamily | Homologous Superfamily | |
IPR000644 | CBS domain | Domain |