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 6DUX | pdb_00006dux

2.25 Angstrom Resolution Crystal Structure of 6-phospho-alpha-glucosidase from Klebsiella pneumoniae in Complex with NAD.

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd6duxb1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains automated matches automated matches (Klebsiella pneumoniae ) [TaxId: 573 ], SCOPe (2.08)
Bd6duxb2 Alpha and beta proteins (a+b) LDH C-terminal domain-like LDH C-terminal domain-like automated matches automated matches (Klebsiella pneumoniae ) [TaxId: 573 ], SCOPe (2.08)
Bd6duxb3 Artifacts Tags Tags Tags N-terminal Tags (Klebsiella pneumoniae ) [TaxId: 573 ], SCOPe (2.08)
Ad6duxa1 Alpha and beta proteins (a/b) NAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains automated matches automated matches (Klebsiella pneumoniae ) [TaxId: 573 ], SCOPe (2.08)
Ad6duxa2 Alpha and beta proteins (a+b) LDH C-terminal domain-like LDH C-terminal domain-like automated matches automated matches (Klebsiella pneumoniae ) [TaxId: 573 ], SCOPe (2.08)
Ad6duxa3 Artifacts Tags Tags Tags N-terminal Tags (Klebsiella pneumoniae ) [TaxId: 573 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyLDH/MDH/AglA-like 8082056 3000039 SCOP2B (2022-06-29)
ASCOP2 FamilyAglA-like 8082055 4000089 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyLDH/MDH/AglA-like 8082056 3000039 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BOB_NTP_binde6duxB1 A: alpha arraysX: L-aspartase middle domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: OB_NTP_bindECOD (v295.2)
ATrypsine6duxA1 A: alpha arraysX: Major facilitator superfamily (MFS) general substrate transporterH: Major facilitator superfamily (MFS) general substrate transporterT: Major facilitator superfamily (MFS) general substrate transporterF: TrypsinECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
B3.90.110.10 Alpha Beta Alpha-Beta Complex L-2-Hydroxyisocaproate Dehydrogenase Chain A, domain 2CATH (4.3.0)
A3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
A3.90.110.10 Alpha Beta Alpha-Beta Complex L-2-Hydroxyisocaproate Dehydrogenase Chain A, domain 2CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
6-phospho-alpha-glucosidase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR022616Glycosyl hydrolase, family 4, C-terminalDomain
A, B
IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily
A, B
IPR019802Glycoside hydrolase, family 4, conserved siteConserved Site
A, B
IPR015955Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminalHomologous Superfamily
A, B
IPR001088Glycoside hydrolase, family 4Family