6DUQ

Structure of a Rho-NusG KOW domain complex

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth L]	SCOP2B Superfamily	RecA-like P-loop NTPases	8057376	3002019	SCOP2B (2022-06-29)
A [auth L]	SCOP2B Superfamily	Nucleic acid-binding proteins	8057374	3000135	SCOP2B (2022-06-29)
B [auth A]	SCOP2B Superfamily	Rho N-terminal domain-like	8057372	3001774	SCOP2B (2022-06-29)
B [auth A]	SCOP2B Superfamily	RecA-like P-loop NTPases	8057376	3002019	SCOP2B (2022-06-29)
B [auth A]	SCOP2B Superfamily	Nucleic acid-binding proteins	8057374	3000135	SCOP2B (2022-06-29)
C [auth G]	SCOP2B Superfamily	Nucleic acid-binding proteins	8057374	3000135	SCOP2B (2022-06-29)
C [auth G]	SCOP2B Superfamily	RecA-like P-loop NTPases	8057376	3002019	SCOP2B (2022-06-29)
C [auth G]	SCOP2B Superfamily	Rho N-terminal domain-like	8057372	3001774	SCOP2B (2022-06-29)
D [auth B]	SCOP2B Superfamily	RecA-like P-loop NTPases	8057376	3002019	SCOP2B (2022-06-29)
D [auth B]	SCOP2B Superfamily	Nucleic acid-binding proteins	8057374	3000135	SCOP2B (2022-06-29)
E [auth H]	SCOP2B Superfamily	RecA-like P-loop NTPases	8057376	3002019	SCOP2B (2022-06-29)
E [auth H]	SCOP2B Superfamily	Nucleic acid-binding proteins	8057374	3000135	SCOP2B (2022-06-29)
F [auth C]	SCOP2B Superfamily	RecA-like P-loop NTPases	8057376	3002019	SCOP2B (2022-06-29)
F [auth C]	SCOP2B Superfamily	Nucleic acid-binding proteins	8057374	3000135	SCOP2B (2022-06-29)
F [auth C]	SCOP2B Superfamily	Rho N-terminal domain-like	8057372	3001774	SCOP2B (2022-06-29)
G [auth I]	SCOP2B Superfamily	Rho N-terminal domain-like	8057372	3001774	SCOP2B (2022-06-29)
G [auth I]	SCOP2B Superfamily	RecA-like P-loop NTPases	8057376	3002019	SCOP2B (2022-06-29)
G [auth I]	SCOP2B Superfamily	Nucleic acid-binding proteins	8057374	3000135	SCOP2B (2022-06-29)
H [auth D]	SCOP2B Superfamily	RecA-like P-loop NTPases	8057376	3002019	SCOP2B (2022-06-29)
H [auth D]	SCOP2B Superfamily	Nucleic acid-binding proteins	8057374	3000135	SCOP2B (2022-06-29)
I [auth K]	SCOP2B Superfamily	RecA-like P-loop NTPases	8057376	3002019	SCOP2B (2022-06-29)
I [auth K]	SCOP2B Superfamily	Nucleic acid-binding proteins	8057374	3000135	SCOP2B (2022-06-29)
I [auth K]	SCOP2B Superfamily	Rho N-terminal domain-like	8057372	3001774	SCOP2B (2022-06-29)
J [auth F]	SCOP2B Superfamily	Nucleic acid-binding proteins	8057374	3000135	SCOP2B (2022-06-29)
J [auth F]	SCOP2B Superfamily	RecA-like P-loop NTPases	8057376	3002019	SCOP2B (2022-06-29)
K [auth J]	SCOP2B Superfamily	RecA-like P-loop NTPases	8057376	3002019	SCOP2B (2022-06-29)
K [auth J]	SCOP2B Superfamily	Nucleic acid-binding proteins	8057374	3000135	SCOP2B (2022-06-29)
L [auth E]	SCOP2B Superfamily	RecA-like P-loop NTPases	8057376	3002019	SCOP2B (2022-06-29)
L [auth E]	SCOP2B Superfamily	Nucleic acid-binding proteins	8057374	3000135	SCOP2B (2022-06-29)
L [auth E]	SCOP2B Superfamily	Rho N-terminal domain-like	8057372	3001774	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth L]	Rho_RNA_bind	e6duqL3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Rho_RNA_bind	ECOD (1.6)
A [auth L]	Rho_N	e6duqL2	A: alpha arrays	X: LEM/SAP HeH motif-like	H: LEM/SAP HeH motif	T: LEM/SAP HeH motif	F: Rho_N	ECOD (1.6)
A [auth L]	ATP-synt_ab	e6duqL1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
B [auth A]	Rho_RNA_bind	e6duqA3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Rho_RNA_bind	ECOD (1.6)
B [auth A]	Rho_N	e6duqA1	A: alpha arrays	X: LEM/SAP HeH motif-like	H: LEM/SAP HeH motif	T: LEM/SAP HeH motif	F: Rho_N	ECOD (1.6)
B [auth A]	ATP-synt_ab	e6duqA2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
C [auth G]	Rho_RNA_bind	e6duqG1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Rho_RNA_bind	ECOD (1.6)
C [auth G]	Rho_N	e6duqG3	A: alpha arrays	X: LEM/SAP HeH motif-like	H: LEM/SAP HeH motif	T: LEM/SAP HeH motif	F: Rho_N	ECOD (1.6)
C [auth G]	ATP-synt_ab	e6duqG2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
D [auth B]	Rho_RNA_bind	e6duqB1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Rho_RNA_bind	ECOD (1.6)
D [auth B]	Rho_N	e6duqB2	A: alpha arrays	X: LEM/SAP HeH motif-like	H: LEM/SAP HeH motif	T: LEM/SAP HeH motif	F: Rho_N	ECOD (1.6)
D [auth B]	ATP-synt_ab	e6duqB3	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
E [auth H]	Rho_RNA_bind	e6duqH2	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Rho_RNA_bind	ECOD (1.6)
E [auth H]	Rho_N	e6duqH3	A: alpha arrays	X: LEM/SAP HeH motif-like	H: LEM/SAP HeH motif	T: LEM/SAP HeH motif	F: Rho_N	ECOD (1.6)
E [auth H]	ATP-synt_ab	e6duqH1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
F [auth C]	Rho_RNA_bind	e6duqC1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Rho_RNA_bind	ECOD (1.6)
F [auth C]	Rho_N	e6duqC3	A: alpha arrays	X: LEM/SAP HeH motif-like	H: LEM/SAP HeH motif	T: LEM/SAP HeH motif	F: Rho_N	ECOD (1.6)
F [auth C]	ATP-synt_ab	e6duqC2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
G [auth I]	Rho_RNA_bind	e6duqI1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Rho_RNA_bind	ECOD (1.6)
G [auth I]	Rho_N	e6duqI2	A: alpha arrays	X: LEM/SAP HeH motif-like	H: LEM/SAP HeH motif	T: LEM/SAP HeH motif	F: Rho_N	ECOD (1.6)
G [auth I]	ATP-synt_ab	e6duqI3	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
H [auth D]	Rho_RNA_bind	e6duqD2	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Rho_RNA_bind	ECOD (1.6)
H [auth D]	Rho_N	e6duqD3	A: alpha arrays	X: LEM/SAP HeH motif-like	H: LEM/SAP HeH motif	T: LEM/SAP HeH motif	F: Rho_N	ECOD (1.6)
H [auth D]	ATP-synt_ab	e6duqD1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
I [auth K]	Rho_RNA_bind	e6duqK1	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Rho_RNA_bind	ECOD (1.6)
I [auth K]	Rho_N	e6duqK2	A: alpha arrays	X: LEM/SAP HeH motif-like	H: LEM/SAP HeH motif	T: LEM/SAP HeH motif	F: Rho_N	ECOD (1.6)
I [auth K]	ATP-synt_ab	e6duqK3	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
J [auth F]	Rho_RNA_bind	e6duqF2	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Rho_RNA_bind	ECOD (1.6)
J [auth F]	Rho_N	e6duqF3	A: alpha arrays	X: LEM/SAP HeH motif-like	H: LEM/SAP HeH motif	T: LEM/SAP HeH motif	F: Rho_N	ECOD (1.6)
J [auth F]	ATP-synt_ab	e6duqF1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
K [auth J]	Rho_RNA_bind	e6duqJ3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Rho_RNA_bind	ECOD (1.6)
K [auth J]	Rho_N	e6duqJ1	A: alpha arrays	X: LEM/SAP HeH motif-like	H: LEM/SAP HeH motif	T: LEM/SAP HeH motif	F: Rho_N	ECOD (1.6)
K [auth J]	ATP-synt_ab	e6duqJ2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
L [auth E]	Rho_RNA_bind	e6duqE3	A: beta barrels	X: OB-fold	H: Nucleic acid-binding proteins (From Topology)	T: Nucleic acid-binding proteins	F: Rho_RNA_bind	ECOD (1.6)
L [auth E]	Rho_N	e6duqE1	A: alpha arrays	X: LEM/SAP HeH motif-like	H: LEM/SAP HeH motif	T: LEM/SAP HeH motif	F: Rho_N	ECOD (1.6)
L [auth E]	ATP-synt_ab	e6duqE2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
M	KOW	e6duqM1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: KOW	ECOD (1.6)
N	KOW	e6duqN1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: KOW	ECOD (1.6)
O	KOW	e6duqO1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: KOW	ECOD (1.6)
P	KOW	e6duqP1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: KOW	ECOD (1.6)
Q	KOW	e6duqQ1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: KOW	ECOD (1.6)
R	KOW	e6duqR1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: KOW	ECOD (1.6)
S	KOW	e6duqS1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: KOW	ECOD (1.6)
T	KOW	e6duqT1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: KOW	ECOD (1.6)
U	KOW	e6duqU1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: KOW	ECOD (1.6)
V	KOW	e6duqV1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: KOW	ECOD (1.6)
W	KOW	e6duqW1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: KOW	ECOD (1.6)
X	KOW	e6duqX1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: KOW	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A [auth L]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)
A [auth L]	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
B [auth A]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)
B [auth A]	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
C [auth G]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)
C [auth G]	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
D [auth B]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)
D [auth B]	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
E [auth H]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)
E [auth H]	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
F [auth C]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)
F [auth C]	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
G [auth I]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)
G [auth I]	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
H [auth D]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)
H [auth D]	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
I [auth K]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)
I [auth K]	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
J [auth F]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)
J [auth F]	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
K [auth J]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)
K [auth J]	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)
L [auth E]	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)
L [auth E]	3.40.50.300	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	P-loop containing nucleotide triphosphate hydrolases	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], F [auth C], G [auth I], H [auth D], I [auth K], J [auth F], K [auth J], L [auth E]	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)	ATP synthase alpha/beta family, nucleotide-binding domain	This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.	Domain
A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], F [auth C], G [auth I], H [auth D], I [auth K], J [auth F], K [auth J], L [auth E]	PF07498	Rho termination factor, N-terminal domain (Rho_N)	Rho termination factor, N-terminal domain	The Rho termination factor disengages newly transcribed RNA from its DNA template at certain, specific transcripts. It it thought that two copies of Rho bind to RNA and that Rho functions as a hexamer of protomers [1]. This domain is found to the N- ...	The Rho termination factor disengages newly transcribed RNA from its DNA template at certain, specific transcripts. It it thought that two copies of Rho bind to RNA and that Rho functions as a hexamer of protomers [1]. This domain is found to the N-terminus of the RNA binding domain (Pfam:PF07497).	Domain
A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], F [auth C], G [auth I], H [auth D], I [auth K], J [auth F], K [auth J], L [auth E]	PF07497	Rho termination factor, RNA-binding domain (Rho_RNA_bind)	Rho termination factor, RNA-binding domain	The Rho termination factor disengages newly transcribed RNA from its DNA template at certain, specific transcripts. It it thought that two copies of Rho bind to RNA and that Rho functions as a hexamer of protomers [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], F [auth C], G [auth I], H [auth D], I [auth K], J [auth F], K [auth J], L [auth E]	Transcription termination factor Rho	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding catalytic activity, acting on a nucleic acid helicase activity catalytic activity ATP-dependent activity ATP-dependent activity, acting on RNA pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides RNA binding nucleic acid binding identical protein binding protein binding	cellular biosynthetic process cellular metabolic process RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression DNA-templated transcription termination macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process cellular biosynthetic process cellular metabolic process RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression DNA-templated transcription termination macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process	membrane cellular anatomical entity intracellular anatomical structure cytoplasm cytosol
M, N, O, P, Q M, N, O, P, Q, R, S, T, U, V, W, X	Transcription termination/antitermination protein NusG	-	negative regulation of termination of DNA-templated transcription regulation of cellular process negative regulation of biological process protein-containing complex disassembly positive regulation of macromolecule biosynthetic process regulation of protein-containing complex disassembly negative regulation of cellular metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process nucleobase-containing compound metabolic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process positive regulation of macromolecule metabolic process negative regulation of termination of DNA-templated transcription regulation of cellular process negative regulation of biological process protein-containing complex disassembly positive regulation of macromolecule biosynthetic process regulation of protein-containing complex disassembly negative regulation of cellular metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process nucleobase-containing compound metabolic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process positive regulation of macromolecule metabolic process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process cellular component disassembly negative regulation of DNA-templated transcription regulation of biological process negative regulation of cellular component organization cellular metabolic process negative regulation of metabolic process regulation of cellular metabolic process primary metabolic process negative regulation of cellular biosynthetic process regulation of gene expression biosynthetic process negative regulation of macromolecule biosynthetic process regulation of termination of DNA-templated transcription regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process regulation of cellular component organization transcription antitermination cellular biosynthetic process positive regulation of biological process RNA metabolic process positive regulation of cellular metabolic process DNA-templated transcription termination RNA biosynthetic process cellular component organization nucleic acid biosynthetic process positive regulation of biosynthetic process negative regulation of protein-containing complex disassembly negative regulation of cellular process cellular component organization or biogenesis positive regulation of cellular process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process protein-containing complex organization biological regulation regulation of macromolecule metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process regulation of cellular biosynthetic process positive regulation of gene expression negative regulation of biosynthetic process cellular process positive regulation of cellular biosynthetic process transcription elongation by RNA polymerase II transcription by RNA polymerase II chromatin organization chromatin remodeling transcription elongation-coupled chromatin remodeling DNA-templated transcription elongation cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis regulation of DNA-templated transcription elongation	membrane-bounded organelle protein-containing complex intracellular anatomical structure transcription elongation factor complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membrane-bounded organelle cellular anatomical entity intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle membrane-bounded organelle protein-containing complex intracellular anatomical structure transcription elongation factor complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membrane-bounded organelle cellular anatomical entity intracellular organelle lumen intracellular organelle nucleoplasm organelle lumen organelle nuclear lumen cytoplasm cytosol
Y, Z	rU12	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], F [auth C], G [auth I], H [auth D], I [auth K], J [auth F], K [auth J], L [auth E]	IPR011129	Cold-shock domain	Domain
A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], F [auth C], G [auth I], H [auth D], I [auth K], J [auth F], K [auth J], L [auth E]	IPR004665	Transcription termination factor Rho	Family
A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], F [auth C], G [auth I], H [auth D], I [auth K], J [auth F], K [auth J], L [auth E]	IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	Domain
A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], F [auth C], G [auth I], H [auth D], I [auth K], J [auth F], K [auth J], L [auth E]	IPR003593	AAA+ ATPase domain	Domain
A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], F [auth C], G [auth I], H [auth D], I [auth K], J [auth F], K [auth J], L [auth E]	IPR036269	Rho termination factor, N-terminal domain superfamily	Homologous Superfamily
A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], F [auth C], G [auth I], H [auth D], I [auth K], J [auth F], K [auth J], L [auth E]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], F [auth C], G [auth I], H [auth D], I [auth K], J [auth F], K [auth J], L [auth E]	IPR011112	Rho termination factor-like, N-terminal	Domain
A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], F [auth C], G [auth I], H [auth D], I [auth K], J [auth F], K [auth J], L [auth E]	IPR011113	Rho termination factor, RNA-binding domain	Domain
A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], F [auth C], G [auth I], H [auth D], I [auth K], J [auth F], K [auth J], L [auth E]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], A [auth L], B [auth A], C [auth G], D [auth B], E [auth H], F [auth C], G [auth I], H [auth D], I [auth K], J [auth F], K [auth J], L [auth E]	IPR041703	Transcription termination factor Rho, ATP binding domain	Domain
M, N, O, P, Q M, N, O, P, Q, R, S, T, U, V, W, X	IPR043425	NusG-like	Family
M, N, O, P, Q M, N, O, P, Q, R, S, T, U, V, W, X	IPR001062	Transcription antitermination protein, NusG	Family
M, N, O, P, Q M, N, O, P, Q, R, S, T, U, V, W, X	IPR036735	NusG, N-terminal domain superfamily	Homologous Superfamily
M, N, O, P, Q M, N, O, P, Q, R, S, T, U, V, W, X	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
M, N, O, P, Q M, N, O, P, Q, R, S, T, U, V, W, X	IPR015869	Transcription antitermination protein, NusG, bacteria, conserved site	Conserved Site
M, N, O, P, Q M, N, O, P, Q, R, S, T, U, V, W, X	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
M, N, O, P, Q M, N, O, P, Q, R, S, T, U, V, W, X	IPR047050	NusG, N-terminal	Domain
M, N, O, P, Q M, N, O, P, Q, R, S, T, U, V, W, X	IPR005824	KOW	Domain
M, N, O, P, Q M, N, O, P, Q, R, S, T, U, V, W, X	IPR006645	NusG-like, N-terminal	Domain