Crystal structure of the multidrug binding transcriptional regulator LmrR in complex with Rhodium Bis-diphosphine Complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d6do0b1 | All alpha proteins | DNA/RNA-binding 3-helical bundle | 'Winged helix' DNA-binding domain | automated matches | automated matches | (Lactococcus cremoris subsp. cremoris MG1363 ) [TaxId: 416870 ], | SCOPe (2.08) |
| B | d6do0b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Lactococcus cremoris subsp. cremoris MG1363 ) [TaxId: 416870 ], | SCOPe (2.08) |
| A | d6do0a_ | All alpha proteins | DNA/RNA-binding 3-helical bundle | 'Winged helix' DNA-binding domain | automated matches | automated matches | (Lactococcus cremoris subsp. cremoris MG1363 ) [TaxId: 416870 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | C1-set | e6do0B1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Ubiquitin-related | T: Ubiquitin-like | F: C1-set | ECOD (v295.2) |
| A | ubiquitin | e6do0A1 | A: alpha arrays | X: PriB N-terminal domain-like | H: Ubiquitin-related | T: Ubiquitin-like | F: ubiquitin | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
| A | 1.10.10.10 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | CATH (4.3.0) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
| IPR005149 | Transcription regulator PadR, N-terminal | Domain | |
| IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
| IPR052509 | Metal-responsive DNA-binding regulator | Family |
