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 6DGB | pdb_00006dgb

Crystal structure of the C-terminal catalytic domain of IS1535 TnpA, an IS607-like serine recombinase

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BY_phosphatasee6dgbB1 A: alpha arraysX: fingers domain in bacteriophage RB69-like DNA polymerase IH: fingers domain in bacteriophage RB69-like DNA polymerase IT: fingers domain in bacteriophage RB69-like DNA polymerase IF: Y_phosphataseECOD (v295.2)
AGalP_UDP_tr_Ce6dgbA1 A: alpha arraysX: Major facilitator superfamily (MFS) general substrate transporterH: Major facilitator superfamily (MFS) general substrate transporterT: Major facilitator superfamily (MFS) general substrate transporterF: GalP_UDP_tr_CECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.50.1390 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Resolvase, N-terminal catalytic domainCATH (4.3.0)
A3.40.50.1390 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Resolvase, N-terminal catalytic domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00239Resolvase, N terminal domain (Resolvase)Resolvase, N terminal domainThe N-terminal domain of the resolvase family (this family) contains the active site and the dimer interface. The extended arm at the C-terminus of this domain connects to the C-terminal helix-turn-helix domain of resolvase - see Pfam:PF02796. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
IS607 family transposase IS1535 - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR036162Resolvase-like, N-terminal catalytic domain superfamilyHomologous Superfamily
A, B
IPR006119Resolvase, N-terminal catalytic domainDomain
A, B
IPR048046IS607 transposaseFamily
A, B
IPR041718IS607-like transposase, catalytic domainDomain
A, B
IPR051491Site-specific recombinase/transposase-relatedFamily