6D9J

Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyTranslational proteins 8078357 3000811 SCOP2B (2022-06-29)
CSCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like 8052828 3002143 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRibosomal protein L4 8052829 3001146 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyRibosomal protein L16p/L10e 8097320 3000884 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyRL5-like 8073894 3001709 SCOP2B (2022-06-29)
K [auth L]SCOP2 FamilyRibosomal protein L13e 8061344 4006241 SCOP2 (2022-06-29)
K [auth L]SCOP2 SuperfamilyRibosomal protein L13e-like 8061345 3002162 SCOP2 (2022-06-29)
M [auth N]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082477 3000210 SCOP2B (2022-06-29)
U [auth V]SCOP2B Superfamily50S Ribosomal protein L14-like 8072048 3000433 SCOP2B (2022-06-29)
W [auth X]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8095966 3000210 SCOP2B (2022-06-29)
X [auth Y]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076754 3000334 SCOP2B (2022-06-29)
Y [auth Z]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053047 3000334 SCOP2B (2022-06-29)
Z [auth a]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8097818 3001045 SCOP2B (2022-06-29)
BA [auth c]SCOP2B SuperfamilyL30e-like 8094953 3001739 SCOP2B (2022-06-29)
DA [auth e]SCOP2B SuperfamilyRibosomal protein L32e 8102088 3000982 SCOP2B (2022-06-29)
EA [auth f]SCOP2B SuperfamilyTranslational proteins 8093714 3000811 SCOP2B (2022-06-29)
FA [auth g]SCOP2B SuperfamilyRibosomal protein L34e-like 8103328 3002203 SCOP2B (2022-06-29)
HA [auth i]SCOP2B SuperfamilyRibosomal protein L36e 8053119 3002161 SCOP2B (2022-06-29)
KA [auth l]SCOP2B SuperfamilyRibosomal protein L39e 8095597 3001756 SCOP2B (2022-06-29)
OA [auth p]SCOP2B SuperfamilyZn-binding ribosomal proteins 8101435 3001320 SCOP2B (2022-06-29)
VA [auth K]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like 8065344 3001911 SCOP2B (2022-06-29)
YA [auth CC]SCOP2B SuperfamilyRibosomal S3Ae-like 8053216 3002166 SCOP2B (2022-06-29)
CB [auth GG]SCOP2B SuperfamilyRibosomal protein S7 8066001 3000799 SCOP2B (2022-06-29)
FB [auth JJ]SCOP2B Superfamily50S Ribosomal protein L14-like 8053075 3000433 SCOP2B (2022-06-29)
HB [auth LL]SCOP2 FamilyeS10-like 8097829 4007434 SCOP2 (2022-06-29)
HB [auth LL]SCOP2 SuperfamilyWinged helix DNA-binding domain 8097830 3000034 SCOP2 (2022-06-29)
IB [auth MM]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052708 3002138 SCOP2B (2022-06-29)
IB [auth MM]SCOP2B SuperfamilyNucleic acid-binding proteins 8052707 3000135 SCOP2B (2022-06-29)
JB [auth NN]SCOP2B SuperfamilyL30e-like 8063980 3001739 SCOP2B (2022-06-29)
KB [auth OO]SCOP2B SuperfamilyHomeodomain-like 8052970 3000001 SCOP2B (2022-06-29)
KB [auth OO]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052971 3001284 SCOP2B (2022-06-29)
LB [auth PP]SCOP2B SuperfamilyTranslational machinery components 8097824 3000571 SCOP2B (2022-06-29)
NB [auth RR]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082683 3000100 SCOP2B (2022-06-29)
PB [auth TT]SCOP2B SuperfamilyS13-like H2TH domain 8101439 3000053 SCOP2B (2022-06-29)
QB [auth UU]SCOP2B SuperfamilyWinged helix DNA-binding domain 8089322 3000034 SCOP2B (2022-06-29)
RB [auth VV]SCOP2B SuperfamilyRibosomal protein S10 8097814 3001336 SCOP2B (2022-06-29)
TB [auth XX]SCOP2B SuperfamilyRibosomal protein S8 8079081 3000709 SCOP2B (2022-06-29)
WB [auth aa]SCOP2B SuperfamilyWinged helix DNA-binding domain 8090991 3000034 SCOP2B (2022-06-29)
ZB [auth dd]SCOP2B SuperfamilyNucleic acid-binding proteins 8095265 3000135 SCOP2B (2022-06-29)
BC [auth ff]SCOP2B SuperfamilyRibosomal protein S30e-like 8053455 3002190 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00181e6d9jA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
APF03947e6d9jA2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
BPF00297e6d9jB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
CPF00573e6d9jC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
CPF14374e6d9jC2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
DPF14204,PF17144e6d9jD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
EPF01159,PF03868e6d9jE1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159,PF03868ECOD (1.6)
FPF00327,PF08079e6d9jF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
GPF01248e6d9jG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
HPF00347e6d9jH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
IPF00252e6d9jI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
JPF00281,PF00673e6d9jJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
K [auth L]PF01294e6d9jL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
L [auth M]PF00467,PF01929e6d9jM1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01929ECOD (1.6)
M [auth N]PF00827e6d9jN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
N [auth O]PF00572e6d9jO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
O [auth P]PF00237e6d9jP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
P [auth Q]PF17135e6d9jQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
Q [auth R]PF01280e6d9jR1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
Q [auth R]PF01280e6d9jR2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
R [auth S]F_UNCLASSIFIEDe6d9jS1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
R [auth S]PF01775e6d9jS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
S [auth T]PF01157e6d9jT1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
T [auth U]PF01776e6d9jU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
U [auth V]PF00238e6d9jV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
V [auth W]PF01246e6d9jW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
W [auth X]PF00276,PF03939e6d9jX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
X [auth Y]PF16906e6d9jY1 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
Y [auth Z]PF00467,PF01777e6d9jZ1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01777ECOD (1.6)
Z [auth a]PF00828e6d9ja1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
AA [auth b]PF01779e6d9jb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
BA [auth c]PF01248e6d9jc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
CA [auth d]PF01198e6d9jd1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
DA [auth e]PF01655e6d9je1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
EA [auth f]PF01247e6d9jf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
FA [auth g]PF01199e6d9jg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
GA [auth h]PF00831e6d9jh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
HA [auth i]PF01158e6d9ji1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
IA [auth j]PF01907e6d9jj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
JA [auth k]PF01781e6d9jk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
KA [auth l]PF00832e6d9jl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
LA [auth m]PF01020e6d9jm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
MA [auth n]PF05162e6d9jn1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: PF05162ECOD (1.6)
NA [auth o]PF00935e6d9jo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
OA [auth p]PF01780e6d9jp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
PA [auth r]PF01778e6d9jr1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: PF01778ECOD (1.6)
QA [auth s]PF00466e6d9js1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: PF00466ECOD (1.6)
QA [auth s]PF17777e6d9js2 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: PF17777ECOD (1.6)
RA [auth t]PF00298e6d9jt1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
RA [auth t]PF03946e6d9jt2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: PF03946ECOD (1.6)
VA [auth K]PF00687e6d9jK1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: PF00687ECOD (1.6)
VA [auth K]PF00687e6d9jK2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: PF00687ECOD (1.6)
XA [auth BB]PF00318e6d9jBB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
YA [auth CC]PF01015e6d9jCC1 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
YA [auth CC]PF01015e6d9jCC2 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)
ZA [auth DD]PF03719e6d9jDD3 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
ZA [auth DD]PF00333e6d9jDD1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
ZA [auth DD]PF00333e6d9jDD2 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF00333ECOD (1.6)
AB [auth EE]PF00189e6d9jEE1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
AB [auth EE]PF07650e6d9jEE2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
BB [auth FF]PF00900e6d9jFF3 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
BB [auth FF]PF00467,PF16121e6d9jFF1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF16121ECOD (1.6)
BB [auth FF]PF00900,PF01479,PF08071e6d9jFF2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00900,PF01479,PF08071ECOD (1.6)
CB [auth GG]PF00177e6d9jGG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
DB [auth HH]PF01092e6d9jHH1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
EB [auth II]PF01251e6d9jII1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: PF01251ECOD (1.6)
FB [auth JJ]PF01201e6d9jJJ1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
GB [auth KK]PF00163,PF01479e6d9jKK1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
HB [auth LL]PF03501e6d9jLL1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
IB [auth MM]PF00366,PF16205e6d9jMM1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366,PF16205ECOD (1.6)
JB [auth NN]PF01248e6d9jNN1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
KB [auth OO]PF08069e6d9jOO2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
KB [auth OO]PF00312e6d9jOO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
LB [auth PP]PF00411e6d9jPP1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
MB [auth QQ]PF00203e6d9jQQ1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
NB [auth RR]PF00380e6d9jRR1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
PB [auth TT]PF00416e6d9jTT1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
QB [auth UU]PF01090e6d9jUU1 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
RB [auth VV]PF00338e6d9jVV1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
SB [auth WW]PF01249e6d9jWW1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: PF01249ECOD (1.6)
TB [auth XX]PF00410e6d9jXX2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
TB [auth XX]PF00410e6d9jXX1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
UB [auth YY]PF00164e6d9jYY1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
VB [auth ZZ]PF01282e6d9jZZ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF01282ECOD (1.6)
WB [auth aa]PF03297e6d9jaa1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03297ECOD (1.6)
YB [auth cc]PF01667e6d9jcc1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
ZB [auth dd]PF01200e6d9jdd1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
AC [auth ee]PF00253e6d9jee1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
BC [auth ff]PF04758e6d9jff1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: PF04758ECOD (1.6)
CC [auth gg]PF01599e6d9jgg1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01599ECOD (1.6)
DC [auth hh]PF00400e6d9jhh1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
FC [auth 9]PF03144e6d9j93 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF03144ECOD (1.6)
FC [auth 9]PF03764e6d9j92 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03764ECOD (1.6)
FC [auth 9]PF00679e6d9j95 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: PF00679ECOD (1.6)
FC [auth 9]PF14492e6d9j94 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: PF14492ECOD (1.6)
FC [auth 9]PF00009e6d9j91 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00009ECOD (1.6)
OB [auth SS]PF00833e6d9jSS1 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
XB [auth bb]PF01283e6d9jbb1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01283ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
K [auth L]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
L [auth M]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
M [auth N]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
N [auth O]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
O [auth P]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
O [auth P]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
Q [auth R]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
S [auth T]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
S [auth T]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain
U [auth V]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
V [auth W]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
W [auth X]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
X [auth Y]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
X [auth Y]PF00467KOW motif (KOW)KOW motif- Family
Y [auth Z]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
Y [auth Z]PF00467KOW motif (KOW)KOW motif- Family
VA [auth K]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
YA [auth CC]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
AB [auth EE]PF07650KH domain (KH_2)KH domain- Domain
AB [auth EE]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
CB [auth GG]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
CB [auth GG]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
DB [auth HH]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
DB [auth HH]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
FB [auth JJ]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
GB [auth KK]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
GB [auth KK]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
HB [auth LL]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
IB [auth MM]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
IB [auth MM]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
JB [auth NN]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
KB [auth OO]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
KB [auth OO]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
LB [auth PP]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
MB [auth QQ]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
NB [auth RR]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
PB [auth TT]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
QB [auth UU]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
RB [auth VV]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
TB [auth XX]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
UB [auth YY]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
VB [auth ZZ]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
FC [auth 9]PF00679Elongation factor G C-terminus (EFG_C)Elongation factor G C-terminusThis domain includes the carboxyl terminal regions of Elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopt a ferredoxin-like fold.Domain
FC [auth 9]PF00009Elongation factor Tu GTP binding domain (GTP_EFTU)Elongation factor Tu GTP binding domainThis domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.Domain
FC [auth 9]PF14492Elongation Factor G, domain III (EFG_III)Elongation Factor G, domain IIIThis domain is found in Elongation Factor G. It shares a similar structure with domain V (Pfam:PF00679). Structural studies in drosophila indicate this is domain 3 [1].Domain
FC [auth 9]PF03144Elongation factor Tu domain 2 (GTP_EFTU_D2)Elongation factor Tu domain 2Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ...Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain.
Domain
FC [auth 9]PF03764Elongation factor G, domain IV (EFG_IV)Elongation factor G, domain IVThis domain is found in elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopts a ribosomal protein S5 domain 2-like fold.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
uL2
uL3
uL4
uL18
eL6
uL30
eL8
uL6
uL16
uL11
K [auth L]eL13- - -
L [auth M]eL14
M [auth N]eL15
N [auth O]uL13---
O [auth P]uL22
P [auth Q]eL18---
Q [auth R]eL19---
R [auth S]eL20---
S [auth T]eL21
T [auth U]eL22---
U [auth V]uL14
V [auth W]eL24
W [auth X]eL23
X [auth Y]uL24
Y [auth Z]eL27
Z [auth a]uL15
AA [auth b]eL29
BA [auth c]eL30
CA [auth d]eL31
DA [auth e]eL32
EA [auth f]eL33
FA [auth g]eL34
GA [auth h]eL35
HA [auth i]eL36
IA [auth j]eL37
JA [auth k]eL38---
KA [auth l]eL39
LA [auth m]eL40---
MA [auth n]eL41---
NA [auth o]eL42
OA [auth p]eL43
PA [auth r]eL28
QA [auth s]uL10---
RA [auth t]uL11
SA [auth 5]28S rRNA---
TA [auth 7]5S rRNA---
UA [auth 8]5.8S rRNA---
VA [auth K]uL1
WA [auth 2]18S rRNA---
XA [auth BB]uS2---
YA [auth CC]eS1
ZA [auth DD]uS5---
AB [auth EE]uS3
BB [auth FF]eS4---
CB [auth GG]uS7
DB [auth HH]eS6
EB [auth II]eS7
FB [auth JJ]eS8
GB [auth KK]uS4
HB [auth LL]eS10 -
IB [auth MM]uS17
JB [auth NN]eS12
KB [auth OO]uS15
LB [auth PP]uS11
MB [auth QQ]uS19
NB [auth RR]uS9
PB [auth TT]uS13
QB [auth UU]eS19
RB [auth VV]uS10
SB [auth WW]eS21---
TB [auth XX]uS8
UB [auth YY]uS12
VB [auth ZZ]eS24
WB [auth aa]eS25
YB [auth cc]eS27
ZB [auth dd]eS28
AC [auth ee]eS29---
BC [auth ff]eS30
CC [auth gg]eS31
DC [auth hh]RACK1
EC [auth 3]P-site tRNA---
FC [auth 9]eEF2
GC [auth 4]CrPV IRES---
OB [auth SS]eS17
XB [auth bb]eS26---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR023672Large ribosomal subunit protein uL2, archaeal-typeFamily
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
IPR002171Large ribosomal subunit protein uL2Family
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
IPR000597Large ribosomal subunit protein uL3Family
IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
IPR002136Large ribosomal subunit protein uL4Family
IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR000915Large ribosomal subunit protein eL6Family
IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
IPR039699Large ribosomal subunit protein uL30Family
IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
IPR001921Large ribosomal subunit protein eL8Family
IPR050257Eukaryotic ribosomal RNA-processing and assembly proteinFamily
IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
IPR018492Ribosomal protein eL8/Nhp2 familyFamily
IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
IPR000702Large ribosomal subunit protein uL6-likeFamily
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
IPR016180Large ribosomal subunit protein uL16 domainDomain
IPR047873Large ribosomal subunit protein uL16Family
IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
IPR002132Large ribosomal subunit protein uL5Family
L [auth M]IPR039660Large ribosomal subunit protein eL14Family
L [auth M]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
L [auth M]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
L [auth M]IPR002784Large ribosomal subunit protein eL14 domainDomain
L [auth M]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
M [auth N]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
M [auth N]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
M [auth N]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
M [auth N]IPR000439Large ribosomal subunit protein eL15Family
O [auth P]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
O [auth P]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
O [auth P]IPR001063Large ribosomal subunit protein uL22Family
O [auth P]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
S [auth T]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
S [auth T]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
S [auth T]IPR001147Large ribosomal subunit protein eL21Family
S [auth T]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth V]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
U [auth V]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
U [auth V]IPR000218Large ribosomal subunit protein uL14Family
V [auth W]IPR011017TRASH domainDomain
V [auth W]IPR000988Large ribosomal subunit protein eL24-relatedFamily
V [auth W]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
V [auth W]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
W [auth X]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
W [auth X]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
W [auth X]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
W [auth X]IPR019985Large ribosomal subunit protein uL23Family
W [auth X]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
W [auth X]IPR013025Large ribosomal subunit protein uL23-likeFamily
X [auth Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
X [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
X [auth Y]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
X [auth Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
X [auth Y]IPR005824KOWDomain
X [auth Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
Y [auth Z]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
Y [auth Z]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Y [auth Z]IPR001141Large ribosomal subunit protein eL27Family
Y [auth Z]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
Y [auth Z]IPR005824KOWDomain
Y [auth Z]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
Z [auth a]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
Z [auth a]IPR021131Large ribosomal subunit protein uL15/eL18Domain
Z [auth a]IPR030878Large ribosomal subunit protein uL15Family
Z [auth a]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
Z [auth a]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
AA [auth b]IPR002673Large ribosomal subunit protein eL29Family
BA [auth c]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
BA [auth c]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
BA [auth c]IPR000231Large ribosomal subunit protein eL30Family
BA [auth c]IPR039109Large ribosomal subunit protein eL30-likeFamily
BA [auth c]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
CA [auth d]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
CA [auth d]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
CA [auth d]IPR000054Large ribosomal subunit protein eL31Family
DA [auth e]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
DA [auth e]IPR001515Large ribosomal subunit protein eL32Family
DA [auth e]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
EA [auth f]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
EA [auth f]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
EA [auth f]IPR001780Large ribosomal subunit protein eL33Family
EA [auth f]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
FA [auth g]IPR008195Large ribosomal subunit protein eL34Family
FA [auth g]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
GA [auth h]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
GA [auth h]IPR001854Large ribosomal subunit protein uL29Family
GA [auth h]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
GA [auth h]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
HA [auth i]IPR000509Large ribosomal subunit protein eL36Family
HA [auth i]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
IA [auth j]IPR001569Large ribosomal subunit protein eL37Family
IA [auth j]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
IA [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
IA [auth j]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
KA [auth l]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
KA [auth l]IPR000077Large ribosomal subunit protein eL39Family
KA [auth l]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
NA [auth o]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
NA [auth o]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
NA [auth o]IPR000552Large ribosomal subunit protein eL42Family
OA [auth p]IPR002674Large ribosomal subunit protein eL43Family
OA [auth p]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
OA [auth p]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
PA [auth r]IPR029004Ribosomal eL28/Mak16Domain
PA [auth r]IPR002672Large ribosomal subunit protein eL28Family
RA [auth t]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
RA [auth t]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
RA [auth t]IPR000911Ribosomal protein uL11Family
RA [auth t]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
RA [auth t]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
RA [auth t]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
VA [auth K]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
VA [auth K]IPR050257Eukaryotic ribosomal RNA-processing and assembly proteinFamily
VA [auth K]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
VA [auth K]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
VA [auth K]IPR002143Large ribosomal subunit protein uL1Family
VA [auth K]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
YA [auth CC]IPR001593Small ribosomal subunit protein eS1Family
YA [auth CC]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
YA [auth CC]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
AB [auth EE]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
AB [auth EE]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
AB [auth EE]IPR004044K Homology domain, type 2Domain
AB [auth EE]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
AB [auth EE]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
AB [auth EE]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
AB [auth EE]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
CB [auth GG]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
CB [auth GG]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
CB [auth GG]IPR000235Small ribosomal subunit protein uS7Family
CB [auth GG]IPR023798Small ribosomal subunit protein uS7 domainDomain
CB [auth GG]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
DB [auth HH]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
DB [auth HH]IPR001377Small ribosomal subunit protein eS6Family
DB [auth HH]IPR014401Small ribosomal subunit protein eS6-likeFamily
EB [auth II]IPR000554Small ribosomal subunit protein eS7Family
EB [auth II]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
FB [auth JJ]IPR001047Small ribosomal subunit protein eS8Family
FB [auth JJ]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
FB [auth JJ]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
FB [auth JJ]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
GB [auth KK]IPR002942RNA-binding S4 domainDomain
GB [auth KK]IPR022801Small ribosomal subunit protein uS4Family
GB [auth KK]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
GB [auth KK]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
GB [auth KK]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
GB [auth KK]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
HB [auth LL]IPR037447Small ribosomal subunit protein eS10Family
HB [auth LL]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
HB [auth LL]IPR005326Plectin/eS10, N-terminalDomain
IB [auth MM]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
IB [auth MM]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IB [auth MM]IPR000266Small ribosomal subunit protein uS17Family
IB [auth MM]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
IB [auth MM]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
JB [auth NN]IPR000530Small ribosomal subunit protein eS12Family
JB [auth NN]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
JB [auth NN]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
JB [auth NN]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
KB [auth OO]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
KB [auth OO]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
KB [auth OO]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
KB [auth OO]IPR000589Small ribosomal subunit protein uS15Family
LB [auth PP]IPR001971Small ribosomal subunit protein uS11Family
LB [auth PP]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
LB [auth PP]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
MB [auth QQ]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
MB [auth QQ]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
MB [auth QQ]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
MB [auth QQ]IPR002222Small ribosomal subunit protein uS19Family
NB [auth RR]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
NB [auth RR]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
NB [auth RR]IPR000754Small ribosomal subunit protein uS9Family
NB [auth RR]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
PB [auth TT]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
PB [auth TT]IPR001892Small ribosomal subunit protein uS13Family
PB [auth TT]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
PB [auth TT]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
QB [auth UU]IPR001266Small ribosomal subunit protein eS19Family
QB [auth UU]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
QB [auth UU]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
QB [auth UU]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
RB [auth VV]IPR001848Small ribosomal subunit protein uS10Family
RB [auth VV]IPR027486Small ribosomal subunit protein uS10 domainDomain
RB [auth VV]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
RB [auth VV]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
RB [auth VV]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
TB [auth XX]IPR000630Small ribosomal subunit protein uS8Family
TB [auth XX]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
TB [auth XX]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
UB [auth YY]IPR006032Small ribosomal subunit protein uS12Family
UB [auth YY]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
UB [auth YY]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
VB [auth ZZ]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
VB [auth ZZ]IPR001976Small ribosomal subunit protein eS24Family
VB [auth ZZ]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
VB [auth ZZ]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
WB [auth aa]IPR004977Small ribosomal subunit protein eS25Family
WB [auth aa]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
YB [auth cc]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
YB [auth cc]IPR000592Small ribosomal subunit protein eS27Family
YB [auth cc]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
ZB [auth dd]IPR028626Ribosomal protein eS28 conserved siteConserved Site
ZB [auth dd]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
ZB [auth dd]IPR000289Small ribosomal subunit protein eS28Family
BC [auth ff]IPR039415Ubiquitin-like protein FUBIDomain
BC [auth ff]IPR019956Ubiquitin domainDomain
BC [auth ff]IPR019954Ubiquitin conserved siteConserved Site
BC [auth ff]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
BC [auth ff]IPR000626Ubiquitin-like domainDomain
BC [auth ff]IPR006846Small ribosomal subunit protein eS30Family
CC [auth gg]IPR019954Ubiquitin conserved siteConserved Site
CC [auth gg]IPR000626Ubiquitin-like domainDomain
CC [auth gg]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
CC [auth gg]IPR002906Small ribosomal subunit protein eS31Domain
CC [auth gg]IPR019956Ubiquitin domainDomain
CC [auth gg]IPR050158Ubiquitin and ubiquitin-likeFamily
CC [auth gg]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
CC [auth gg]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DC [auth hh]IPR019775WD40 repeat, conserved siteConserved Site
DC [auth hh]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
DC [auth hh]IPR045223Small ribosomal subunit protein RACK1-likeFamily
DC [auth hh]IPR001680WD40 repeatRepeat
DC [auth hh]IPR020472G-protein beta WD-40 repeatRepeat
DC [auth hh]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
FC [auth 9]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
FC [auth 9]IPR000795Translational (tr)-type GTP-binding domainDomain
FC [auth 9]IPR035647EF-G domain III/V-likeHomologous Superfamily
FC [auth 9]IPR041095Elongation Factor G, domain IIDomain
FC [auth 9]IPR004161Translation elongation factor EFTu-like, domain 2Domain
FC [auth 9]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
FC [auth 9]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
FC [auth 9]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
FC [auth 9]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
FC [auth 9]IPR005225Small GTP-binding domainDomain
FC [auth 9]IPR000640Elongation factor EFG, domain V-likeDomain
FC [auth 9]IPR031157Tr-type G domain, conserved siteConserved Site
OB [auth SS]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
OB [auth SS]IPR001210Small ribosomal subunit protein eS17Family
OB [auth SS]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site