Annotations: 6D0O

rdpA dioxygenase holoenzyme

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d6d0od1	All beta proteins	Double-stranded beta-helix	Clavaminate synthase-like	automated matches	automated matches	Sphingomonas herbicidovorans (Sphingobium herbicidovorans NBRC 16415 ) [TaxId: 1219045 ],	SCOPe (2.08)
D	d6d0od2	Artifacts	Tags	Tags	Tags	C-terminal Tags	Sphingomonas herbicidovorans (Sphingobium herbicidovorans NBRC 16415 ) [TaxId: 1219045 ],	SCOPe (2.08)
C	d6d0oc1	All beta proteins	Double-stranded beta-helix	Clavaminate synthase-like	automated matches	automated matches	Sphingomonas herbicidovorans (Sphingobium herbicidovorans NBRC 16415 ) [TaxId: 1219045 ],	SCOPe (2.08)
C	d6d0oc2	Artifacts	Tags	Tags	Tags	C-terminal Tags	Sphingomonas herbicidovorans (Sphingobium herbicidovorans NBRC 16415 ) [TaxId: 1219045 ],	SCOPe (2.08)
B	d6d0ob1	All beta proteins	Double-stranded beta-helix	Clavaminate synthase-like	automated matches	automated matches	Sphingomonas herbicidovorans (Sphingobium herbicidovorans NBRC 16415 ) [TaxId: 1219045 ],	SCOPe (2.08)
B	d6d0ob2	Artifacts	Tags	Tags	Tags	C-terminal Tags	Sphingomonas herbicidovorans (Sphingobium herbicidovorans NBRC 16415 ) [TaxId: 1219045 ],	SCOPe (2.08)
A	d6d0oa1	All beta proteins	Double-stranded beta-helix	Clavaminate synthase-like	automated matches	automated matches	Sphingomonas herbicidovorans (Sphingobium herbicidovorans NBRC 16415 ) [TaxId: 1219045 ],	SCOPe (2.08)
A	d6d0oa2	Artifacts	Tags	Tags	Tags	C-terminal Tags	Sphingomonas herbicidovorans (Sphingobium herbicidovorans NBRC 16415 ) [TaxId: 1219045 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Clavaminate synthase-like	8080572	3001848	SCOP2B (2022-06-29)
C	SCOP2 Family	TauD/TfdA-like	8080571	4002161	SCOP2 (2022-06-29)
C	SCOP2 Superfamily	Clavaminate synthase-like	8080572	3001848	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Clavaminate synthase-like	8080572	3001848	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Clavaminate synthase-like	8080572	3001848	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Y_phosphatase	e6d0oD1	A: alpha arrays	X: fingers domain in bacteriophage RB69-like DNA polymerase I	H: fingers domain in bacteriophage RB69-like DNA polymerase I	T: fingers domain in bacteriophage RB69-like DNA polymerase I	F: Y_phosphatase	ECOD (v295.2)
C	Y_phosphatase	e6d0oC1	A: alpha arrays	X: fingers domain in bacteriophage RB69-like DNA polymerase I	H: fingers domain in bacteriophage RB69-like DNA polymerase I	T: fingers domain in bacteriophage RB69-like DNA polymerase I	F: Y_phosphatase	ECOD (v295.2)
B	Y_phosphatase	e6d0oB1	A: alpha arrays	X: fingers domain in bacteriophage RB69-like DNA polymerase I	H: fingers domain in bacteriophage RB69-like DNA polymerase I	T: fingers domain in bacteriophage RB69-like DNA polymerase I	F: Y_phosphatase	ECOD (v295.2)
A	Cel124_C	e6d0oA1	A: alpha arrays	X: Major facilitator superfamily (MFS) general substrate transporter	H: Major facilitator superfamily (MFS) general substrate transporter	T: Major facilitator superfamily (MFS) general substrate transporter	F: Cel124_C	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.60.130.10	Alpha Beta	4-Layer Sandwich	Double-stranded beta-helix	Clavaminate synthase-like	CATH (4.3.0)
C	3.60.130.10	Alpha Beta	4-Layer Sandwich	Double-stranded beta-helix	Clavaminate synthase-like	CATH (4.3.0)
B	3.60.130.10	Alpha Beta	4-Layer Sandwich	Double-stranded beta-helix	Clavaminate synthase-like	CATH (4.3.0)
A	3.60.130.10	Alpha Beta	4-Layer Sandwich	Double-stranded beta-helix	Clavaminate synthase-like	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	(R)-phenoxypropionate/alpha-ketoglutarate-dioxygenase	oxidoreductase activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 2-oxoglutarate-dependent dioxygenase activity catalytic activity dioxygenase activity	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR003819	TauD/TfdA-like domain	Domain
A, B, C, D	IPR051323	Alpha-ketoglutarate-dependent sulfate ester dioxygenase-like	Family
A, B, C, D	IPR042098	Glutarate 2-hydroxylase superfamily	Homologous Superfamily