6CPZ
Selenomethionine mutant (I6Sem) of protein GB1 examined by X-ray diffraction
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6cpza1 | Alpha and beta proteins (a+b) | beta-Grasp (ubiquitin-like) | Immunoglobulin-binding domains | Immunoglobulin-binding domains | Immunoglobulin-binding protein G, different constituent domains | (Streptococcus sp. 'group G ) [TaxId: 1320 ], | SCOPe (2.08) |
A | d6cpza2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Streptococcus sp. 'group G ) [TaxId: 1320 ], | SCOPe (2.08) |
B | d6cpzb1 | Alpha and beta proteins (a+b) | beta-Grasp (ubiquitin-like) | Immunoglobulin-binding domains | Immunoglobulin-binding domains | Immunoglobulin-binding protein G, different constituent domains | (Streptococcus sp. 'group G ) [TaxId: 1320 ], | SCOPe (2.08) |
B | d6cpzb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Streptococcus sp. 'group G ) [TaxId: 1320 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | IgG_binding_B | e6cpzA1 | A: a+b two layers | X: beta-Grasp | H: Immunoglobulin-binding domains (From Topology) | T: Immunoglobulin-binding domains | F: IgG_binding_B | ECOD (1.6) |
B | IgG_binding_B | e6cpzB1 | A: a+b two layers | X: beta-Grasp | H: Immunoglobulin-binding domains (From Topology) | T: Immunoglobulin-binding domains | F: IgG_binding_B | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.20.10 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | CATH (utative) | |
B | 3.10.20.10 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01378 | B domain (IgG_binding_B) | B domain | This domain is found as a tandem repeat in Streptococcal cell surface proteins, such as the IgG binding protein G. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Immunoglobulin G-binding protein G | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009063 | Immunoglobulin/albumin-binding domain superfamily | Homologous Superfamily | |
IPR019950 | M protein-type anchor domain | Domain | |
IPR005877 | YSIRK Gram-positive signal peptide | Domain | |
IPR000724 | IgG-binding B | Domain | |
IPR035152 | GA-like domain | Domain | |
IPR019931 | LPXTG cell wall anchor domain | Domain |