Annotations: 6CBC

Crystal structure of an N-terminal fragment of Vps13.

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Chorein_N	e6cbcB1	A: beta barrels	X: N-terminal region of lipid transporter Vps13	H: N-terminal region of lipid transporter Vps13	T: N-terminal region of lipid transporter Vps13	F: Chorein_N	ECOD (v294.2)
A	Chorein_N	e6cbcA1	A: beta barrels	X: HUP domain-like	H: N-terminal region of lipid transporter Vps13	T: N-terminal region of lipid transporter Vps13	F: Chorein_N	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF12624	VPS13-like family N-terminal region (VPS13_N)	VPS13-like family N-terminal region	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Vacuolar protein sorting-associated protein	lipid carrier activity phospholipid transfer activity lipid transfer activity transporter activity molecular carrier activity binding phospholipid binding lipid binding	cellular localization transport intracellular transport establishment of localization vesicle-mediated transport localization intercellular transport late endosome to vacuole transport establishment of localization in cell cellular process vacuolar transport establishment of protein localization protein targeting establishment of protein localization to vacuole cellular localization transport intracellular transport establishment of localization vesicle-mediated transport localization intercellular transport late endosome to vacuole transport establishment of localization in cell cellular process vacuolar transport establishment of protein localization protein targeting establishment of protein localization to vacuole protein localization to vacuole establishment of protein localization to organelle protein transport protein localization to organelle macromolecule localization intracellular protein localization protein targeting to vacuole intracellular protein transport membrane organization intermembrane lipid transfer lipid localization lipid transport cellular component organization cellular component organization or biogenesis maintenance of protein location protein localization to Golgi apparatus maintenance of location maintenance of location in cell maintenance of protein location in cell protein retention in Golgi apparatus organelle organization mitochondrion organization	cellular anatomical structure membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR026847	Vacuolar protein sorting-associated protein 13	Family
A, B	IPR017148	Vacuolar protein sorting-associated protein 13, fungi	Family
A, B	IPR056748	Intermembrane lipid transfer protein VPS13-like, C-terminal	Domain
A, B	IPR026854	Vacuolar protein sorting-associated protein 13, N-terminal domain	Domain
A, B	IPR056747	VPS13-like, middle region	Domain
A, B	IPR009543	Vacuolar protein sorting-associated protein 13, VPS13 adaptor binding domain	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

6CBC | pdb_00006cbc

Crystal structure of an N-terminal fragment of Vps13.

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage