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 6C87 | pdb_00006c87

Crystal structure of rab gdp dissociation inhibitor alpha from Naegleria fowleri

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DOB_NTP_binde6c87D1 A: alpha arraysX: FAD-linked reductases, C-terminal domain-likeH: FAD-linked reductases-CT: FAD-linked reductases-CF: OB_NTP_bindECOD (v295.2)
COB_NTP_binde6c87C1 A: alpha arraysX: FAD-linked reductases, C-terminal domain-likeH: FAD-linked reductases-CT: FAD-linked reductases-CF: OB_NTP_bindECOD (v295.2)
BOB_NTP_binde6c87B1 A: alpha arraysX: FAD-linked reductases, C-terminal domain-likeH: FAD-linked reductases-CT: FAD-linked reductases-CF: OB_NTP_bindECOD (v295.2)
ARibosomal_S13e6c87A1 A: alpha arraysX: FAD-linked reductases, C-terminal domain-likeH: FAD-linked reductases-CT: FAD-linked reductases-CF: Ribosomal_S13ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.50.50.60 Alpha Beta 3-Layer(bba) Sandwich FAD/NAD(P)-binding domain FAD/NAD(P)-binding domainCATH (4.3.0)
D3.30.519.10 Alpha Beta 2-Layer Sandwich Guanine Nucleotide Dissociation Inhibitor domain 2CATH (4.3.0)
D1.10.405.10 Mainly Alpha Orthogonal Bundle Guanine Nucleotide Dissociation Inhibitor domain 1CATH (4.3.0)
C3.50.50.60 Alpha Beta 3-Layer(bba) Sandwich FAD/NAD(P)-binding domain FAD/NAD(P)-binding domainCATH (4.3.0)
C3.30.519.10 Alpha Beta 2-Layer Sandwich Guanine Nucleotide Dissociation Inhibitor domain 2CATH (4.3.0)
C1.10.405.10 Mainly Alpha Orthogonal Bundle Guanine Nucleotide Dissociation Inhibitor domain 1CATH (4.3.0)
B3.50.50.60 Alpha Beta 3-Layer(bba) Sandwich FAD/NAD(P)-binding domain FAD/NAD(P)-binding domainCATH (4.3.0)
B3.30.519.10 Alpha Beta 2-Layer Sandwich Guanine Nucleotide Dissociation Inhibitor domain 2CATH (4.3.0)
B1.10.405.10 Mainly Alpha Orthogonal Bundle Guanine Nucleotide Dissociation Inhibitor domain 1CATH (4.3.0)
A3.50.50.60 Alpha Beta 3-Layer(bba) Sandwich FAD/NAD(P)-binding domain FAD/NAD(P)-binding domainCATH (4.3.0)
A3.30.519.10 Alpha Beta 2-Layer Sandwich Guanine Nucleotide Dissociation Inhibitor domain 2CATH (4.3.0)
A1.10.405.10 Mainly Alpha Orthogonal Bundle Guanine Nucleotide Dissociation Inhibitor domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00996GDP dissociation inhibitor (GDI)GDP dissociation inhibitor- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Rab GDP dissociation inhibitor alpha

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR000806Rab GDI proteinFamily
A, B, C, D
IPR018203GDP dissociation inhibitorFamily
A, B, C, D
IPR036188FAD/NAD(P)-binding domain superfamilyHomologous Superfamily