6BM5
Crystal Structure of the MetH Reactivation Domain bound to AdoMet
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6bm5a_ | Alpha and beta proteins (a+b) | Methionine synthase activation domain-like | Methionine synthase activation domain-like | Methionine synthase SAM-binding domain | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF02965 | e6bm5A1 | A: a+b complex topology | X: Methionine synthase activation domain-like (From Topology) | H: Methionine synthase activation domain-like (From Topology) | T: Methionine synthase activation domain-like | F: PF02965 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.196.10 | Alpha Beta | Roll | Cobalamin-dependent Methionine Synthase | domain 1 | CATH (4.3.0) |
A | 1.10.288.10 | Mainly Alpha | Orthogonal Bundle | Cobalamin-dependent Methionine Synthase | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02965 | Vitamin B12 dependent methionine synthase, activation domain (Met_synt_B12) | Vitamin B12 dependent methionine synthase, activation domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003759 | Cobalamin (vitamin B12)-binding module, cap domain | Domain | |
IPR050554 | Methionine Synthase/Corrinoid | Family | |
IPR011005 | Dihydropteroate synthase-like superfamily | Homologous Superfamily | |
IPR033706 | Methionine synthase, B12-binding domain | Domain | |
IPR006158 | Cobalamin (vitamin B12)-binding domain | Domain | |
IPR003726 | Homocysteine-binding domain | Domain | |
IPR004223 | Vitamin B12-dependent methionine synthase, activation domain | Domain | |
IPR036589 | Homocysteine-binding domain superfamily | Homologous Superfamily | |
IPR000489 | Pterin-binding domain | Domain | |
IPR036724 | Cobalamin-binding domain superfamily | Homologous Superfamily | |
IPR011822 | Cobalamin-dependent methionine synthase | Family | |
IPR036594 | Methionine synthase domain | Homologous Superfamily | |
IPR037010 | Vitamin B12-dependent methionine synthase, activation domain superfamily | Homologous Superfamily |