Structure of the Clinically used Myxomaviral Serine Protease Inhibitor 1 (SERP-1)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| E [auth C] | SCOP2B Superfamily | Serpins | 8098490 | 3001563 | SCOP2B (2022-06-29) |
| C [auth A] | SCOP2B Superfamily | Serpins | 8098490 | 3001563 | SCOP2B (2022-06-29) |
| A [auth B] | SCOP2 Family | Serpins | 8098489 | 4002658 | SCOP2 (2022-06-29) |
| A [auth B] | SCOP2 Superfamily | Serpins | 8098490 | 3001563 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D [auth G] | AAA_lid_3 | e6bj5G1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: AAA_lid_3 | ECOD (v295.2) |
| B [auth F] | BRF1 | e6bj5F01 | A: alpha arrays | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: BRF1 | ECOD (v295.2) |
| C [auth A] | TGF_beta | e6bj5A1 | A: alpha arrays | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: L-aspartase middle domain-like | F: TGF_beta | ECOD (v295.2) |
| A [auth B] | SH2 | e6bj5B1 | A: alpha arrays | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like | T: L-aspartase middle domain-like | F: SH2 | ECOD (v295.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A [auth B], C [auth A], E [auth C] | PF00079 | Serpin (serine protease inhibitor) (Serpin) | Serpin (serine protease inhibitor) | Structure is a multi-domain fold containing a bundle of helices and a beta sandwich. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| B [auth F], D [auth G], F [auth H] | Serine proteinase inhibitor 1 | - | - | |
| A [auth B], C [auth A], E [auth C] | Serine proteinase inhibitor 1 | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| B [auth F], D [auth G], F [auth H] | IPR042178 | Serpin superfamily, domain 1 | Homologous Superfamily |
| B [auth F], D [auth G], F [auth H] | IPR023795 | Serpin, conserved site | Conserved Site |
| B [auth F], D [auth G], F [auth H] | IPR042185 | Serpin superfamily, domain 2 | Homologous Superfamily |
| B [auth F], D [auth G], F [auth H] | IPR036186 | Serpin superfamily | Homologous Superfamily |
| B [auth F], D [auth G], F [auth H] | IPR000215 | Serpin family | Family |
| B [auth F], D [auth G], F [auth H] | IPR023796 | Serpin domain | Domain |
| A [auth B], C [auth A], E [auth C] | IPR042178 | Serpin superfamily, domain 1 | Homologous Superfamily |
| A [auth B], C [auth A], E [auth C] | IPR023795 | Serpin, conserved site | Conserved Site |
| A [auth B], C [auth A], E [auth C] | IPR042185 | Serpin superfamily, domain 2 | Homologous Superfamily |
| A [auth B], C [auth A], E [auth C] | IPR036186 | Serpin superfamily | Homologous Superfamily |
| A [auth B], C [auth A], E [auth C] | IPR000215 | Serpin family | Family |
| A [auth B], C [auth A], E [auth C] | IPR023796 | Serpin domain | Domain |