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 6BEK | pdb_00006bek

Structure of sIHF bound to an 8bp palindromic DNA

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DSH2e6bekD1 A: alpha arraysX: L-aspartase middle domain-likeH: L-aspartase middle domain-likeT: L-aspartase middle domain-likeF: SH2ECOD (v295.2)
ABromodomaine6bekA1 A: alpha arraysX: L-aspartase middle domain-likeH: L-aspartase middle domain-likeT: L-aspartase middle domain-likeF: BromodomainECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D1.10.8.50 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
A1.10.8.50 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, D
PF22525S13-like H2TH domain (H2TH_5)S13-like H2TH domainThis entry represents helix-two turn-helix (H2TH) domains that is found in ribosomal S13 proteins and related proteins. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B, C, E, F
DNA (5'-D(*CP*AP*TP*GP*CP*AP*TP*G)-3')---
A, D
SCO1480 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, D
IPR055201Integration host factor-like, helix-two turn-helix domainDomain
A, D
IPR047806Integration host factor, actinobacterial-typeFamily
A, D
IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily