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 6AA7 | pdb_00006aa7

Fluorescent protein from Acropora digitifera

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad6aa7a_ Alpha and beta proteins (a+b) GFP-like GFP-like automated matches automated matches Staghorn coral (Acropora digitifera ) [TaxId: 70779 ], SCOPe (2.08)
Bd6aa7b_ Alpha and beta proteins (a+b) GFP-like GFP-like automated matches automated matches Staghorn coral (Acropora digitifera ) [TaxId: 70779 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyGFP-like 8081051 3000576 SCOP2B (2022-06-29)
BSCOP2 FamilyFluorescent proteins 8081050 4001049 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyGFP-like 8081051 3000576 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ATF_Zn_Ribbone6aa7A1 A: alpha arraysX: Major facilitator superfamily (MFS) general substrate transporterH: Major facilitator superfamily (MFS) general substrate transporterT: Major facilitator superfamily (MFS) general substrate transporterF: TF_Zn_RibbonECOD (v295.2)
BCadherine6aa7B1 A: alpha arraysX: fingers domain in bacteriophage RB69-like DNA polymerase IH: fingers domain in bacteriophage RB69-like DNA polymerase IT: fingers domain in bacteriophage RB69-like DNA polymerase IF: CadherinECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)
B2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Fluorescent protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR011584Green fluorescent protein-relatedFamily
A, B
IPR009017Green fluorescent proteinHomologous Superfamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
XYG Parent Component: ASP, TYR, GLY

:  AA0410

:  2-imino-alanine 5-imidazolinone glycine MOD:00820