5UIE
Vps4-Vta1 complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF09336,PF17862 | e5uieA2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF09336,PF17862 | ECOD (1.6) |
A | PF00004,PF09336 | e5uieA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004,PF09336 | ECOD (1.6) |
B | PF09336,PF17862 | e5uieB2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF09336,PF17862 | ECOD (1.6) |
B | PF00004,PF09336 | e5uieB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004,PF09336 | ECOD (1.6) |
C | PF09336,PF17862 | e5uieC2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF09336,PF17862 | ECOD (1.6) |
C | PF00004,PF09336 | e5uieC1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004,PF09336 | ECOD (1.6) |
D | PF09336,PF17862 | e5uieD1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF09336,PF17862 | ECOD (1.6) |
D | PF00004,PF09336 | e5uieD2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004,PF09336 | ECOD (1.6) |
E | PF09336,PF17862 | e5uieE2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF09336,PF17862 | ECOD (1.6) |
E | PF00004 | e5uieE1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004 | ECOD (1.6) |
F | PF09336,PF17862 | e5uieF1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF09336,PF17862 | ECOD (1.6) |
F | PF00004 | e5uieF2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004 | ECOD (1.6) |
H | PF18097 | e5uieH1 | A: alpha bundles | X: Spectrin repeat-like | H: MIT domain (From Topology) | T: MIT domain | F: PF18097 | ECOD (1.6) |
I | PF18097 | e5uieI1 | A: alpha bundles | X: Spectrin repeat-like | H: MIT domain (From Topology) | T: MIT domain | F: PF18097 | ECOD (1.6) |
J | PF18097 | e5uieJ1 | A: alpha bundles | X: Spectrin repeat-like | H: MIT domain (From Topology) | T: MIT domain | F: PF18097 | ECOD (1.6) |
K | PF18097 | e5uieK1 | A: alpha bundles | X: Spectrin repeat-like | H: MIT domain (From Topology) | T: MIT domain | F: PF18097 | ECOD (1.6) |
L | PF18097 | e5uieL1 | A: alpha bundles | X: Spectrin repeat-like | H: MIT domain (From Topology) | T: MIT domain | F: PF18097 | ECOD (1.6) |
M | PF18097 | e5uieM1 | A: alpha bundles | X: Spectrin repeat-like | H: MIT domain (From Topology) | T: MIT domain | F: PF18097 | ECOD (1.6) |
N | PF18097 | e5uieN1 | A: alpha bundles | X: Spectrin repeat-like | H: MIT domain (From Topology) | T: MIT domain | F: PF18097 | ECOD (1.6) |
O | PF18097 | e5uieO1 | A: alpha bundles | X: Spectrin repeat-like | H: MIT domain (From Topology) | T: MIT domain | F: PF18097 | ECOD (1.6) |
P | PF18097 | e5uieP1 | A: alpha bundles | X: Spectrin repeat-like | H: MIT domain (From Topology) | T: MIT domain | F: PF18097 | ECOD (1.6) |
Q | PF18097 | e5uieQ1 | A: alpha bundles | X: Spectrin repeat-like | H: MIT domain (From Topology) | T: MIT domain | F: PF18097 | ECOD (1.6) |
R | PF18097 | e5uieR1 | A: alpha bundles | X: Spectrin repeat-like | H: MIT domain (From Topology) | T: MIT domain | F: PF18097 | ECOD (1.6) |
S | PF18097 | e5uieS1 | A: alpha bundles | X: Spectrin repeat-like | H: MIT domain (From Topology) | T: MIT domain | F: PF18097 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09336 | Vps4 C terminal oligomerisation domain (Vps4_C) | Vps4 C terminal oligomerisation domain | This domain is found at the C terminal of ATPase proteins involved in vacuolar sorting. It forms an alpha helix structure and is required for oligomerisation [1]. | Domain | |
PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain | |
PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain | |
PF18097 | Vta1 C-terminal domain (Vta1_C) | Vta1 C-terminal domain | This is the C-terminal domain of Vta1 proteins Pfam:PF04652 . Structural and functional analysis indicate that this C-terminal domain promotes the ATP-dependent double ring assembly of Vps4. Furthermore, it has been shown that it is necessary and suf ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003593 | AAA+ ATPase domain | Domain | |
IPR003959 | ATPase, AAA-type, core | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR007330 | MIT domain | Domain | |
IPR041569 | AAA ATPase, AAA+ lid domain | Domain | |
IPR015415 | Spastin/Vps4, C-terminal | Domain | |
IPR045253 | Vacuolar protein sorting-associated protein 4, MIT domain | Domain | |
IPR003960 | ATPase, AAA-type, conserved site | Conserved Site | |
IPR036181 | MIT domain superfamily | Homologous Superfamily | |
IPR039431 | Vta1/callose synthase, N-terminal | Domain | |
IPR023175 | Vta1/Callose synthase, N-terminal domain superfamily | Homologous Superfamily | |
IPR041212 | Vta1, C-terminal | Domain | |
IPR044538 | Vacuolar protein sorting-associated protein Vta1-like | Family |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
ACE | AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 :  N-acetyl-L-alanine MOD:00050 , N-acetyl-L-aspartic acid MOD:00051 , N-acetyl-L-cysteine MOD:00052 , N-acetyl-S-archeol-cysteine MOD:00897 , N-acetyl-L-glutamic acid MOD:00053 , N-acetyl-L-glutamine MOD:00054 , N-acetylglycine MOD:00055 , N-acetyl-L-methionine MOD:00058 , N-acetyl-L-proline MOD:00059 , N-acetyl-L-serine MOD:00060 , N,O-diacetylated L-serine MOD:00648 , N-acetyl-L-threonine MOD:00061 , N-acetyl-L-tyrosine MOD:00062 , N-acetyl-L-valine MOD:00063 , N2-acetyl-L-arginine MOD:00359 | :  |
UNK | AA0041 , AA0042 , AA0043 , AA0044 , AA0045 , AA0046 , AA0049 , AA0050 , AA0051 , AA0052 , AA0053 , AA0054 , AA0354 | :