Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AF_UNCLASSIFIEDe5u6hA2 A: few secondary structure elementsX: CCCH zinc fingerH: CCCH zinc finger (From Topology)T: CCCH zinc fingerF: F_UNCLASSIFIEDECOD (1.6)
APF22628e5u6hA1 A: few secondary structure elementsX: CCCH zinc fingerH: CCCH zinc finger (From Topology)T: CCCH zinc fingerF: PF22628ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.1370.210 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF14608RNA-binding, Nab2-type zinc finger (zf-CCCH_2)RNA-binding, Nab2-type zinc fingerThis is an unusual zinc-finger family, and is represented by fingers 5-7 of Nab2. Nab2 ZnF5-7 are zinc-fingers of the type C-x8-C-x5-C-x3-H. Nab2 ZnFs function in the generation of export-competent mRNPs. Mab2 is a conserved polyadenosine-RNA-binding ...This is an unusual zinc-finger family, and is represented by fingers 5-7 of Nab2. Nab2 ZnF5-7 are zinc-fingers of the type C-x8-C-x5-C-x3-H. Nab2 ZnFs function in the generation of export-competent mRNPs. Mab2 is a conserved polyadenosine-RNA-binding Zn finger protein required for both mRNA export and polyadenylation regulation and becomes attached to the mRNP after splicing and during or immediately after polyadenylation. The three ZnFs, 5-7, have almost identical folds and, most unusually, associate with one another to form a single coherent structural unit. ZnF5-7 bind to eight consecutive adenines, and chemical shift perturbations identify residues on each finger that interact with RNA [1].
Domain
PF22628ZAP-like CCCH zinc finger (zf-CCCH_10)ZAP-like CCCH zinc fingerThis domain is found in Zinc finger CCCH-type antiviral protein 1 from Rattus norvegicus (Zc3hav1, also known as ZAP), which inhibits the replication of viruses by recruiting the cellular RNA degradation machineries to degrade the viral mRNAs. This p ...This domain is found in Zinc finger CCCH-type antiviral protein 1 from Rattus norvegicus (Zc3hav1, also known as ZAP), which inhibits the replication of viruses by recruiting the cellular RNA degradation machineries to degrade the viral mRNAs. This protein has four zinc-finger motifs that are located at the four corners of a twisted rectangle in the bottom layer of the structure [4].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Muscleblind-like protein 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR000571Zinc finger, CCCH-typeDomain