5MX6
Crystal structure of H. pylori purine nucleoside phosphorylase from clinical isolate HpPNP-2
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Purine and uridine phosphorylases | 8081738 | 3000626 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Purine and uridine phosphorylases | 8081738 | 3000626 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Purine and uridine phosphorylases | 8081738 | 3000626 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Purine and uridine phosphorylases | 8081738 | 3000626 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Purine and uridine phosphorylases | 8081738 | 3000626 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Purine and uridine phosphorylases | 8081738 | 3000626 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PNP_UDP_1 | e5mx6A1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like (From Topology) | T: Peptidyl-tRNA hydrolase-like | F: PNP_UDP_1 | ECOD (1.6) |
B | PNP_UDP_1 | e5mx6B1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like (From Topology) | T: Peptidyl-tRNA hydrolase-like | F: PNP_UDP_1 | ECOD (1.6) |
C | PNP_UDP_1 | e5mx6C1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like (From Topology) | T: Peptidyl-tRNA hydrolase-like | F: PNP_UDP_1 | ECOD (1.6) |
D | PNP_UDP_1 | e5mx6D1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like (From Topology) | T: Peptidyl-tRNA hydrolase-like | F: PNP_UDP_1 | ECOD (1.6) |
F | PNP_UDP_1 | e5mx6F1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like (From Topology) | T: Peptidyl-tRNA hydrolase-like | F: PNP_UDP_1 | ECOD (1.6) |
E | PNP_UDP_1 | e5mx6E1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like (From Topology) | T: Peptidyl-tRNA hydrolase-like | F: PNP_UDP_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.1580 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nucleoside phosphorylase domain | CATH (4.3.0) |
B | 3.40.50.1580 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nucleoside phosphorylase domain | CATH (4.3.0) |
C | 3.40.50.1580 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nucleoside phosphorylase domain | CATH (4.3.0) |
D | 3.40.50.1580 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nucleoside phosphorylase domain | CATH (4.3.0) |
F | 3.40.50.1580 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nucleoside phosphorylase domain | CATH (4.3.0) |
E | 3.40.50.1580 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nucleoside phosphorylase domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR018016 | Nucleoside phosphorylase, conserved site | Conserved Site | |
IPR004402 | Purine nucleoside phosphorylase DeoD-type | Family | |
IPR035994 | Nucleoside phosphorylase superfamily | Homologous Superfamily | |
IPR000845 | Nucleoside phosphorylase domain | Domain |