5M5T
Clathrin heavy chain N-terminal domain bound to a non-natural clathrin-box motif peptide (Amph4T1)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | ARM repeat-like | 8042013 | 3000116 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Clathrin heavy-chain terminal domain-like | 8042014 | 3001710 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Clathrin heavy-chain terminal domain-like | 8042014 | 3001710 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | ARM repeat-like | 8042013 | 3000116 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Clathrin_propel | e5m5tA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: Clathrin_propel | ECOD (1.6) |
A | Clathrin-link | e5m5tA2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: Clathrin-link | ECOD (1.6) |
B | Clathrin_propel | e5m5tB1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: Clathrin_propel | ECOD (1.6) |
B | Clathrin-link | e5m5tB2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: Clathrin-link | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.130.10.110 | Mainly Beta | 7 Propeller | Methylamine Dehydrogenase | Chain H | CATH (4.3.0) |
B | 2.130.10.110 | Mainly Beta | 7 Propeller | Methylamine Dehydrogenase | Chain H | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09268 | Clathrin, heavy-chain linker (Clathrin-link) | Clathrin, heavy-chain linker | - | Repeat | |
PF01394 | Clathrin propeller repeat (Clathrin_propel) | Clathrin propeller repeat | - | Repeat | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016341 | Clathrin, heavy chain | Family | |
IPR015348 | Clathrin, heavy chain, linker, core motif | Domain | |
IPR016024 | Armadillo-type fold | Homologous Superfamily | |
IPR011990 | Tetratricopeptide-like helical domain superfamily | Homologous Superfamily | |
IPR016025 | Clathrin heavy chain, N-terminal | Homologous Superfamily | |
IPR000547 | Clathrin, heavy chain/VPS, 7-fold repeat | Repeat | |
IPR022365 | Clathrin, heavy chain, propeller repeat | Repeat | |
IPR004148 | BAR domain | Domain | |
IPR036028 | SH3-like domain superfamily | Homologous Superfamily | |
IPR027267 | AH/BAR domain superfamily | Homologous Superfamily | |
IPR035470 | Amphiphysin I, SH3 domain | Domain | |
IPR001452 | SH3 domain | Domain | |
IPR003005 | Amphiphysin | Family | |
IPR003017 | Amphiphysin, isoform 1 | Family |