5KDM
Crystal structure of EBV tegument protein BNRF1 in complex with histone chaperone DAXX and histones H3.3-H4
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00125 | e5kdmA1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
B | PF15511 | e5kdmB1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
C | PF20920 | e5kdmC1 | A: alpha bundles | X: Death domain-associated protein 6 histone binding domain (From Topology) | H: Death domain-associated protein 6 histone binding domain (From Topology) | T: Death domain-associated protein 6 histone binding domain | F: PF20920 | ECOD (1.6) |
D | PF12818 | e5kdmD1 | A: a+b two layers | X: Alpha-beta plaits | H: PurM C-terminal domain-like (From Topology) | T: PurM C-terminal domain-like | F: PF12818 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.20.10 | Mainly Alpha | Orthogonal Bundle | Histone, subunit A | Histone, subunit A | CATH (4.3.0) |
B | 1.10.20.10 | Mainly Alpha | Orthogonal Bundle | Histone, subunit A | Histone, subunit A | CATH (4.3.0) |
C | 1.20.58.2170 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF20920 | Death domain-associated protein 6, histone binding domain (DAXX_hist_bd) | Death domain-associated protein 6, histone binding domain | This domain is found in the mammalian Death domain-associated protein 6 (DAXX) and in similar proteins from animals. DAXX is a transcription corepressor and a histone chaperone that shows specificity for the conserved histone H3.3. This entry represe ... | Domain | |