Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APentapeptide_4e5jw7A1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Pentapeptide repeats (From Topology)T: Pentapeptide repeatsF: Pentapeptide_4ECOD (1.6)
ASopA_Ce5jw7A2 A: a+b complex topologyX: E3 ubiquitin-protein ligase SopA catalytic domain (From Topology)H: E3 ubiquitin-protein ligase SopA catalytic domain (From Topology)T: E3 ubiquitin-protein ligase SopA catalytic domainF: SopA_CECOD (1.6)
Bzf-C3HC4_4e5jw7B1 A: few secondary structure elementsX: RING/U-box-likeH: RING/U-box-likeT: RING/U-boxF: zf-C3HC4_4ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF13981SopA-like central domain (SopA)SopA-like central domainThis domain is found in the E. coli Type III secretion effector proteins SopA and NleL [1,2]. These proteins have been shown to act as E3 ubiquitin ligase enzymes.Domain
PF13445RING-type zinc-finger (zf-RING_UBOX)RING-type zinc-fingerThis zinc-finger is a typical RING-type of plant ubiquitin ligases [1].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E3 ubiquitin-protein ligase SopA
E3 ubiquitin-protein ligase TRIM56