5I50
Structure of OmoMYC bound to double-stranded DNA
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | HLH_1 | e5i50A1 | A: alpha duplicates or obligate multimers | X: HLH-like | H: HLH, helix-loop-helix DNA-binding domain (From Topology) | T: HLH, helix-loop-helix DNA-binding domain | F: HLH_1 | ECOD (1.6) |
B | HLH_1 | e5i50B1 | A: alpha duplicates or obligate multimers | X: HLH-like | H: HLH, helix-loop-helix DNA-binding domain (From Topology) | T: HLH, helix-loop-helix DNA-binding domain | F: HLH_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 4.10.280.10 | Few Secondary Structures | Irregular | MYOD Basic-Helix-Loop-Helix Domain, subunit B | Helix-loop-helix DNA-binding domain | CATH (4.3.0) |
B | 4.10.280.10 | Few Secondary Structures | Irregular | MYOD Basic-Helix-Loop-Helix Domain, subunit B | Helix-loop-helix DNA-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00010 | Helix-loop-helix DNA-binding domain (HLH) | Helix-loop-helix DNA-binding domain | - | Domain | |
PF02344 | Myc leucine zipper domain (Myc-LZ) | Myc leucine zipper domain | - | Coiled-coil | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050433 | Myc family transcription factors | Family | |
IPR036638 | Helix-loop-helix DNA-binding domain superfamily | Homologous Superfamily | |
IPR002418 | Transcription regulator Myc | Family | |
IPR003327 | Leucine zipper, Myc | Domain | |
IPR012682 | Transcription regulator Myc, N-terminal | Domain | |
IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain | Domain |