5C4V
Ski-like protein
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5c4va_ | All beta proteins | SMAD/FHA domain | SMAD/FHA domain | SMAD domain | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B [auth C] | d5c4vc_ | All beta proteins | SMAD/FHA domain | SMAD/FHA domain | SMAD domain | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C [auth E] | d5c4ve_ | All beta proteins | SMAD/FHA domain | SMAD/FHA domain | SMAD domain | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | SMAD/FHA domain-like | 8041255 | 3000137 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | SMAD/FHA domain-like | 8041255 | 3000137 | SCOP2B (2022-06-29) |
C [auth E] | SCOP2B Superfamily | SMAD/FHA domain-like | 8041255 | 3000137 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2 Family | SMAD4-binding domain of oncoprotein Ski | 8077134 | 4003188 | SCOP2 (2022-06-29) |
D [auth B] | SCOP2 Superfamily | SAND domain-like | 8077135 | 3000421 | SCOP2 (2022-06-29) |
E [auth D] | SCOP2B Superfamily | SAND domain-like | 8077135 | 3000421 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | SAND domain-like | 8077135 | 3000421 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | MH2 | e5c4vA1 | A: beta sandwiches | X: SMAD/FHA domain (From Topology) | H: SMAD/FHA domain (From Topology) | T: SMAD/FHA domain | F: MH2 | ECOD (1.6) |
B [auth C] | MH2 | e5c4vC1 | A: beta sandwiches | X: SMAD/FHA domain (From Topology) | H: SMAD/FHA domain (From Topology) | T: SMAD/FHA domain | F: MH2 | ECOD (1.6) |
C [auth E] | MH2 | e5c4vE1 | A: beta sandwiches | X: SMAD/FHA domain (From Topology) | H: SMAD/FHA domain (From Topology) | T: SMAD/FHA domain | F: MH2 | ECOD (1.6) |
D [auth B] | c-SKI_SMAD_bind | e5c4vB1 | A: beta barrels | X: SH3 | H: SAND (From Topology) | T: SAND | F: c-SKI_SMAD_bind | ECOD (1.6) |
E [auth D] | c-SKI_SMAD_bind | e5c4vD1 | A: beta barrels | X: SH3 | H: SAND (From Topology) | T: SAND | F: c-SKI_SMAD_bind | ECOD (1.6) |
F | c-SKI_SMAD_bind | e5c4vF1 | A: beta barrels | X: SH3 | H: SAND (From Topology) | T: SAND | F: c-SKI_SMAD_bind | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.200.10 | Mainly Beta | Sandwich | Tumour Suppressor Smad4 | CATH (4.3.0) | |
B [auth C] | 2.60.200.10 | Mainly Beta | Sandwich | Tumour Suppressor Smad4 | CATH (4.3.0) | |
C [auth E] | 2.60.200.10 | Mainly Beta | Sandwich | Tumour Suppressor Smad4 | CATH (4.3.0) | |
D [auth B] | 3.10.390.10 | Alpha Beta | Roll | SAND domain | SAND domain-like | CATH (4.3.0) |
E [auth D] | 3.10.390.10 | Alpha Beta | Roll | SAND domain | SAND domain-like | CATH (4.3.0) |
F | 3.10.390.10 | Alpha Beta | Roll | SAND domain | SAND domain-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C], C [auth E] | PF03166 | MH2 domain (MH2) | MH2 domain | - | Family |
D [auth B], E [auth D], F | PF08782 | c-SKI Smad4 binding domain (c-SKI_SMAD_bind) | c-SKI Smad4 binding domain | c-SKI is an oncoprotein that inhibits TGF-beta signaling through interaction with Smad proteins [1]. This domain binds to Smad4 [2] | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C], C [auth E] | IPR013019 | MAD homology, MH1 | Domain |
A, B [auth C], C [auth E] | IPR013790 | Dwarfin | Family |
A, B [auth C], C [auth E] | IPR003619 | MAD homology 1, Dwarfin-type | Domain |
A, B [auth C], C [auth E] | IPR008984 | SMAD/FHA domain superfamily | Homologous Superfamily |
A, B [auth C], C [auth E] | IPR036578 | SMAD MH1 domain superfamily | Homologous Superfamily |
A, B [auth C], C [auth E] | IPR017855 | SMAD-like domain superfamily | Homologous Superfamily |
A, B [auth C], C [auth E] | IPR001132 | SMAD domain, Dwarfin-type | Domain |
D [auth B], E [auth D], F | IPR009061 | Putative DNA-binding domain superfamily | Homologous Superfamily |
D [auth B], E [auth D], F | IPR010919 | SAND-like domain superfamily | Homologous Superfamily |
D [auth B], E [auth D], F | IPR037000 | Ski-like, DNA-binding domain superfamily | Homologous Superfamily |
D [auth B], E [auth D], F | IPR023216 | Transcription regulator SKI/SnoN | Family |
D [auth B], E [auth D], F | IPR003380 | SKI/SNO/DAC domain | Domain |
D [auth B], E [auth D], F | IPR014890 | c-SKI SMAD4-binding domain | Domain |