5ZVT

Structure of RNA polymerase complex and genome within a dsRNA virus provides insights into the mechanisms of transcription and assembly


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AA [auth Q]Reovirus_M2_1ste5zvtQ1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
CA [auth S]Reovirus_M2_1ste5zvtS1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
K [auth A]Reovirus_M2_1ste5zvtA1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
M [auth C]Reovirus_M2_1ste5zvtC1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
O [auth E]Reovirus_M2_1ste5zvtE1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
Q [auth G]Reovirus_M2_1ste5zvtG1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
S [auth I]Reovirus_M2_1ste5zvtI1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
U [auth K]Reovirus_M2_1ste5zvtK1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
W [auth M]Reovirus_M2_1ste5zvtM1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
Y [auth O]Reovirus_M2_1ste5zvtO1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
BA [auth R]Reovirus_M2_2nde5zvtR3 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: Reovirus_M2_2ndECOD (1.6)
BA [auth R]Reovirus_M2_3rde5zvtR1 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: Reovirus_M2_3rdECOD (1.6)
BA [auth R]Reovirus_M2_1ste5zvtR2 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
DA [auth T]Reovirus_M2_2nde5zvtT1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: Reovirus_M2_2ndECOD (1.6)
DA [auth T]Reovirus_M2_3rde5zvtT3 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: Reovirus_M2_3rdECOD (1.6)
DA [auth T]Reovirus_M2_1ste5zvtT2 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
L [auth B]Reovirus_M2_2nde5zvtB2 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: Reovirus_M2_2ndECOD (1.6)
L [auth B]Reovirus_M2_3rde5zvtB1 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: Reovirus_M2_3rdECOD (1.6)
L [auth B]Reovirus_M2_1ste5zvtB3 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
N [auth D]Reovirus_M2_2nde5zvtD1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: Reovirus_M2_2ndECOD (1.6)
N [auth D]Reovirus_M2_3rde5zvtD3 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: Reovirus_M2_3rdECOD (1.6)
N [auth D]Reovirus_M2_1ste5zvtD2 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
P [auth F]Reovirus_M2_2nde5zvtF1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: Reovirus_M2_2ndECOD (1.6)
P [auth F]Reovirus_M2_3rde5zvtF3 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: Reovirus_M2_3rdECOD (1.6)
P [auth F]Reovirus_M2_1ste5zvtF2 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
R [auth H]Reovirus_M2_2nde5zvtH3 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: Reovirus_M2_2ndECOD (1.6)
R [auth H]Reovirus_M2_3rde5zvtH1 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: Reovirus_M2_3rdECOD (1.6)
R [auth H]Reovirus_M2_1ste5zvtH2 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
T [auth J]Reovirus_M2_2nde5zvtJ1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: Reovirus_M2_2ndECOD (1.6)
T [auth J]Reovirus_M2_3rde5zvtJ2 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: Reovirus_M2_3rdECOD (1.6)
T [auth J]Reovirus_M2_1ste5zvtJ3 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
V [auth L]Reovirus_M2_2nde5zvtL3 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: Reovirus_M2_2ndECOD (1.6)
V [auth L]Reovirus_M2_3rde5zvtL2 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: Reovirus_M2_3rdECOD (1.6)
V [auth L]Reovirus_M2_1ste5zvtL1 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
X [auth N]Reovirus_M2_2nde5zvtN1 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: Reovirus_M2_2ndECOD (1.6)
X [auth N]Reovirus_M2_3rde5zvtN2 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: Reovirus_M2_3rdECOD (1.6)
X [auth N]Reovirus_M2_1ste5zvtN3 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
Z [auth P]Reovirus_M2_2nde5zvtP3 A: beta sandwichesX: jelly-rollH: Jelly-roll domain in membrane penetration protein mu1 (From Topology)T: Jelly-roll domain in membrane penetration protein mu1F: Reovirus_M2_2ndECOD (1.6)
Z [auth P]Reovirus_M2_3rde5zvtP1 A: alpha arraysX: Alpha-helical domain in membrane penetration protein mu1 (From Topology)H: Alpha-helical domain in membrane penetration protein mu1 (From Topology)T: Alpha-helical domain in membrane penetration protein mu1F: Reovirus_M2_3rdECOD (1.6)
Z [auth P]Reovirus_M2_1ste5zvtP2 A: a+b complex topologyX: a+b domain in membrane penetration protein mu1 (From Topology)H: a+b domain in membrane penetration protein mu1 (From Topology)T: a+b domain in membrane penetration protein mu1F: Reovirus_M2_1stECOD (1.6)
EA [auth U]Sigma_1_2e5zvtU1 A: alpha complex topologyX: Core protein VP6 (From Topology)H: Core protein VP6 (From Topology)T: Core protein VP6F: Sigma_1_2ECOD (1.6)
FA [auth V]Sigma_1_2e5zvtV1 A: alpha complex topologyX: Core protein VP6 (From Topology)H: Core protein VP6 (From Topology)T: Core protein VP6F: Sigma_1_2ECOD (1.6)
GA [auth W]Reovirus_L2_6the5zvtW2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Reovirus_L2_6thECOD (1.6)
GA [auth W]Reovirus_L2_7the5zvtW4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Reovirus_L2_7thECOD (1.6)
GA [auth W]Reovirus_L2_8the5zvtW5 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Reovirus_L2_8thECOD (1.6)
GA [auth W]Reovirus_L2_4the5zvtW6 A: a+b two layersX: ferredoxin-like domain in VP1 (From Topology)H: ferredoxin-like domain in VP1 (From Topology)T: ferredoxin-like domain in VP1F: Reovirus_L2_4thECOD (1.6)
GA [auth W]Reovirus_L2_2nde5zvtW3 A: a+b three layersX: HIT-likeH: HIT-related (From Topology)T: HIT-relatedF: Reovirus_L2_2ndECOD (1.6)
GA [auth W]Reovirus_L2_1ste5zvtW1 A: a+b complex topologyX: Rotavirus NSP2 fragment, N-terminal domain (From Topology)H: Rotavirus NSP2 fragment, N-terminal domain (From Topology)T: Rotavirus NSP2 fragment, N-terminal domainF: Reovirus_L2_1stECOD (1.6)
GA [auth W]Reovirus_L2_3rde5zvtW8 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: Reovirus_L2_3rdECOD (1.6)
GA [auth W]Reovirus_L2_5the5zvtW7 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: Reovirus_L2_5thECOD (1.6)
HA [auth X]lambda-1e5zvtX1 A: a+b complex topologyX: Inner layer core protein p3-related (From Topology)H: Inner layer core protein p3-related (From Topology)T: Inner layer core protein p3-relatedF: lambda-1ECOD (1.6)
IA [auth Y]lambda-1e5zvtY1 A: a+b complex topologyX: Inner layer core protein p3-related (From Topology)H: Inner layer core protein p3-related (From Topology)T: Inner layer core protein p3-relatedF: lambda-1ECOD (1.6)
IA [auth Y]zf-C2H2_6e5zvtY2 A: few secondary structure elementsX: beta-beta-alpha zinc fingersH: beta-beta-alpha zinc fingers (From Topology)T: beta-beta-alpha zinc fingersF: zf-C2H2_6ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
BA [auth R]1.10.2050.10 Mainly Alpha Orthogonal Bundle Protein mu-1, chain B, domain 3 Protein mu-1, chain B, domain 3CATH (4.3.0)
BA [auth R]2.60.120.420 Mainly Beta Sandwich Jelly Rolls Membrane penetration protein mu1, Chain B, domain 4CATH (4.3.0)
DA [auth T]1.10.2050.10 Mainly Alpha Orthogonal Bundle Protein mu-1, chain B, domain 3 Protein mu-1, chain B, domain 3CATH (4.3.0)
DA [auth T]2.60.120.420 Mainly Beta Sandwich Jelly Rolls Membrane penetration protein mu1, Chain B, domain 4CATH (4.3.0)
L [auth B]1.10.2050.10 Mainly Alpha Orthogonal Bundle Protein mu-1, chain B, domain 3 Protein mu-1, chain B, domain 3CATH (4.3.0)
L [auth B]2.60.120.420 Mainly Beta Sandwich Jelly Rolls Membrane penetration protein mu1, Chain B, domain 4CATH (4.3.0)
N [auth D]1.10.2050.10 Mainly Alpha Orthogonal Bundle Protein mu-1, chain B, domain 3 Protein mu-1, chain B, domain 3CATH (4.3.0)
N [auth D]2.60.120.420 Mainly Beta Sandwich Jelly Rolls Membrane penetration protein mu1, Chain B, domain 4CATH (4.3.0)
P [auth F]1.10.2050.10 Mainly Alpha Orthogonal Bundle Protein mu-1, chain B, domain 3 Protein mu-1, chain B, domain 3CATH (4.3.0)
P [auth F]2.60.120.420 Mainly Beta Sandwich Jelly Rolls Membrane penetration protein mu1, Chain B, domain 4CATH (4.3.0)
R [auth H]1.10.2050.10 Mainly Alpha Orthogonal Bundle Protein mu-1, chain B, domain 3 Protein mu-1, chain B, domain 3CATH (4.3.0)
R [auth H]2.60.120.420 Mainly Beta Sandwich Jelly Rolls Membrane penetration protein mu1, Chain B, domain 4CATH (4.3.0)
T [auth J]1.10.2050.10 Mainly Alpha Orthogonal Bundle Protein mu-1, chain B, domain 3 Protein mu-1, chain B, domain 3CATH (4.3.0)
T [auth J]2.60.120.420 Mainly Beta Sandwich Jelly Rolls Membrane penetration protein mu1, Chain B, domain 4CATH (4.3.0)
V [auth L]1.10.2050.10 Mainly Alpha Orthogonal Bundle Protein mu-1, chain B, domain 3 Protein mu-1, chain B, domain 3CATH (4.3.0)
V [auth L]2.60.120.420 Mainly Beta Sandwich Jelly Rolls Membrane penetration protein mu1, Chain B, domain 4CATH (4.3.0)
X [auth N]1.10.2050.10 Mainly Alpha Orthogonal Bundle Protein mu-1, chain B, domain 3 Protein mu-1, chain B, domain 3CATH (4.3.0)
X [auth N]2.60.120.420 Mainly Beta Sandwich Jelly Rolls Membrane penetration protein mu1, Chain B, domain 4CATH (4.3.0)
Z [auth P]1.10.2050.10 Mainly Alpha Orthogonal Bundle Protein mu-1, chain B, domain 3 Protein mu-1, chain B, domain 3CATH (4.3.0)
Z [auth P]2.60.120.420 Mainly Beta Sandwich Jelly Rolls Membrane penetration protein mu1, Chain B, domain 4CATH (4.3.0)
EA [auth U]1.10.287.1520 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
FA [auth V]1.10.287.1520 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
GA [auth W]3.90.1810.10 Alpha Beta Alpha-Beta Complex Reovirus components fold Reovirus componentsCATH (4.3.0)
GA [auth W]3.55.60.10 Alpha Beta 3-Layer(bab) Sandwich Reovirus components fold Reovirus componentsCATH (4.3.0)
GA [auth W]3.40.50.10760 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Reovirus coreCATH (4.3.0)
GA [auth W]3.40.50.150 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Vaccinia Virus protein VP39CATH (4.3.0)
GA [auth W]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)