5ZVJ
Crystal structure of HtrA1 from Mycobacterium tuberculosis
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Trypsin_2 | e5zvjA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: Trypsin_2 | ECOD (1.6) |
A | PDZ_2 | e5zvjA2 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PDZ_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (4.3.0) |
A | 2.30.42.10 | Mainly Beta | Roll | Pdz3 Domain | PDZ domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF13180 | PDZ domain (PDZ_2) | PDZ domain | - | Domain | |
PF13365 | Trypsin-like peptidase domain (Trypsin_2) | Trypsin-like peptidase domain | This family includes trypsin-like peptidase domains. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Serine protease |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR051201 | Chloroplastic and Bacterial Serine Proteases | Family | |
IPR009003 | Peptidase S1, PA clan | Homologous Superfamily | |
IPR001478 | PDZ domain | Domain | |
IPR001940 | Peptidase S1C | Family | |
IPR043504 | Peptidase S1, PA clan, chymotrypsin-like fold | Homologous Superfamily | |
IPR036034 | PDZ superfamily | Homologous Superfamily |