5ZVG
The crystal structure of NSun6 from Pyrococcus horikoshii with SAM
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PUA | e5zvgB2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: PUA | ECOD (1.6) |
A [auth B] | Methyltr_RsmF_N | e5zvgB3 | A: a+b two layers | X: Alpha-beta plaits | H: NOL1/NOP2/sun N-terminal ferredoxin-like domain (From Topology) | T: NOL1/NOP2/sun N-terminal ferredoxin-like domain | F: Methyltr_RsmF_N | ECOD (1.6) |
A [auth B] | Methyltr_RsmB-F_1 | e5zvgB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: Methyltr_RsmB-F_1 | ECOD (1.6) |
B [auth A] | PUA | e5zvgA2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PUA domain | F: PUA | ECOD (1.6) |
B [auth A] | Methyltr_RsmF_N | e5zvgA3 | A: a+b two layers | X: Alpha-beta plaits | H: NOL1/NOP2/sun N-terminal ferredoxin-like domain (From Topology) | T: NOL1/NOP2/sun N-terminal ferredoxin-like domain | F: Methyltr_RsmF_N | ECOD (1.6) |
B [auth A] | Methyltr_RsmB-F_1 | e5zvgA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: Methyltr_RsmB-F_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 2.30.130.10 | Mainly Beta | Roll | Archaeosine Trna-guanine Transglycosylase | Chain: A, domain 4 | CATH (utative) |
B [auth A] | 2.30.130.10 | Mainly Beta | Roll | Archaeosine Trna-guanine Transglycosylase | Chain: A, domain 4 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF01472 | PUA domain (PUA) | PUA domain | - | Family |
A [auth B], B [auth A] | PF01189 | 16S rRNA methyltransferase RsmB/F (Methyltr_RsmB-F) | 16S rRNA methyltransferase RsmB/F | - | Family |
A [auth B], B [auth A] | PF22458 | Methyltr_RsmF/B-like, ferredoxin-like domain (RsmF-B_ferredox) | Methyltr_RsmF/B-like, ferredoxin-like domain | This entry represents a ferredoxin-like domain found in methyltransferases RsmB, RsmF and related sequences [1-5]. | Domain |