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 5ZQA | pdb_00005zqa

Crystal Structure of Penicillin-Binding Protein D2 from Listeria monocytogenes in the apo form

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad5zqaa_ Multi-domain proteins (alpha and beta) beta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like automated matches automated matches (Listeria monocytogenes EGD-e ) [TaxId: 169963 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 Familybeta-Lactamase/D-ala carboxypeptidase 8080747 4002685 SCOP2 (2022-06-29)
ASCOP2 Superfamilybeta-lactamase/transpeptidase-like 8080748 3001604 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARnaseAe5zqaA1 A: alpha arraysX: Major facilitator superfamily (MFS) general substrate transporterH: Major facilitator superfamily (MFS) general substrate transporterT: Major facilitator superfamily (MFS) general substrate transporterF: RnaseAECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Lmo2812 protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR018044Peptidase S11, D-alanyl-D-alanine carboxypeptidase AFamily
IPR012338Beta-lactamase/transpeptidase-likeHomologous Superfamily
IPR001967Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminalDomain