Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth o]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8072635 3001284 SCOP2B (2022-06-29)
K [auth q]SCOP2B SuperfamilyNucleic acid-binding proteins 8059280 3000135 SCOP2B (2022-06-29)
M [auth s]SCOP2B SuperfamilyRibosomal protein S19 8086054 3000686 SCOP2B (2022-06-29)
P [auth n]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8059256 3000068 SCOP2B (2022-06-29)
Q [auth b]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8063840 3001397 SCOP2B (2022-06-29)
R [auth d]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8083402 3001473 SCOP2B (2022-06-29)
T [auth m]SCOP2B SuperfamilyS13-like H2TH domain 8096982 3000053 SCOP2B (2022-06-29)
D [auth g]SCOP2B SuperfamilyRibosomal protein S7 8077977 3000799 SCOP2B (2022-06-29)
E [auth h]SCOP2B SuperfamilyRibosomal protein S8 8079055 3000709 SCOP2B (2022-06-29)
F [auth i]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082671 3000100 SCOP2B (2022-06-29)
G [auth j]SCOP2B SuperfamilyRibosomal protein S10 8096980 3001336 SCOP2B (2022-06-29)
H [auth k]SCOP2B SuperfamilyTranslational machinery components 8096984 3000571 SCOP2B (2022-06-29)
I [auth l]SCOP2B SuperfamilyNucleic acid-binding proteins 8096978 3000135 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth o]Ribosomal_S15_1e5zeuo1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
K [auth q]Ribosomal_S17_1e5zeuq1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
L [auth r]Ribosomal_S18e5zeur1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
M [auth s]Ribosomal_S19e5zeus1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
N [auth t]Ribosomal_S20pe5zeut1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
P [auth n]Ribosomal_S14e5zeun1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
Q [auth b]Ribosomal_S2e5zeub1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
R [auth d]S4e5zeud1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
S [auth f]Ribosomal_S6e5zeuf1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
B [auth c]Ribosomal_S3_Ce5zeuc2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
B [auth c]KH_2_1e5zeuc1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
T [auth m]Ribosomal_S13_1e5zeum1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
U [auth p]Ribosomal_S16_1e5zeup1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
C [auth e]Ribosomal_S5_Ce5zeue2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
C [auth e]Ribosomal_S5e5zeue1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
D [auth g]Ribosomal_S7_1e5zeug1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
E [auth h]Ribosomal_S8_Ne5zeuh2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
E [auth h]Ribosomal_S8_Ce5zeuh1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
F [auth i]Ribosomal_S9e5zeui1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
G [auth j]Ribosomal_S10e5zeuj1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
H [auth k]Ribosomal_S11e5zeuk1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
I [auth l]Ribosom_S12_S23e5zeul1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
K [auth q]2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
M [auth s]3.30.860.10 Alpha Beta 2-Layer Sandwich 30s Ribosomal Protein S19 Chain ACATH (4.3.0)
N [auth t]1.20.58.110 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
P [auth n]4.10.830.10 Few Secondary Structures Irregular 30s Ribosomal Protein S14 Chain NCATH (4.3.0)
Q [auth b]3.40.50.10490 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Glucose-6-phosphate isomerase like proteinCATH (4.3.0)
Q [auth b]1.10.287.610 Mainly Alpha Orthogonal Bundle Helix Hairpins Helix hairpin binCATH (4.3.0)
B [auth c]3.30.300.20 Alpha Beta 2-Layer Sandwich GMP Synthetase Chain A, domain 3CATH (4.3.0)
B [auth c]3.30.1140.32 Alpha Beta 2-Layer Sandwich Ribosomal protein S3 C-terminal domain Ribosomal protein S3, C-terminal domainCATH (4.3.0)
T [auth m]1.10.8.50 Mainly Alpha Orthogonal Bundle Helicase, Ruva Protein domain 3CATH (4.3.0)
T [auth m]4.10.910.10 Few Secondary Structures Irregular 30s ribosomal protein s13 domain 2CATH (4.3.0)
E [auth h]3.30.1370.30 Alpha Beta 2-Layer Sandwich Ribosomal Protein S8 Chain: A, domain 1CATH (4.3.0)
E [auth h]3.30.1490.10 Alpha Beta 2-Layer Sandwich Dna Ligase domain 1CATH (4.3.0)
F [auth i]3.30.230.10 Alpha Beta 2-Layer Sandwich Ribosomal Protein S5 domain 2CATH (4.3.0)
G [auth j]3.30.70.600 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Ribosomal protein S10CATH (4.3.0)
H [auth k]3.30.420.80 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)
I [auth l]2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth a]16S rRNA---
J [auth o]30S ribosomal protein S15
K [auth q]30S ribosomal protein S17
L [auth r]30S ribosomal protein S18 2
M [auth s]30S ribosomal protein S19
N [auth t]30S ribosomal protein S20
O [auth v]P-tRNAfMet---
P [auth n]30S ribosomal protein S14 type Z
Q [auth b]30S ribosomal protein S2
R [auth d]30S ribosomal protein S4
S [auth f]30S ribosomal protein S6---
B [auth c]30S ribosomal protein S3
T [auth m]30S ribosomal protein S13
U [auth p]30S ribosomal protein S16
V [auth u]Conserved domain protein- - -
C [auth e]30S ribosomal protein S5
D [auth g]30S ribosomal protein S7
E [auth h]30S ribosomal protein S8
F [auth i]30S ribosomal protein S9
G [auth j]30S ribosomal protein S10
H [auth k]30S ribosomal protein S11
I [auth l]30S ribosomal protein S12

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth o]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
J [auth o]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
J [auth o]IPR000589Small ribosomal subunit protein uS15Family
K [auth q]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
K [auth q]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
K [auth q]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
K [auth q]IPR000266Small ribosomal subunit protein uS17Family
L [auth r]IPR001648Small ribosomal subunit protein bS18Family
L [auth r]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
L [auth r]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
M [auth s]IPR002222Small ribosomal subunit protein uS19Family
M [auth s]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
M [auth s]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
M [auth s]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
N [auth t]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
N [auth t]IPR002583Small ribosomal subunit protein bS20Family
P [auth n]IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
P [auth n]IPR001209Small ribosomal subunit protein uS14Family
P [auth n]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
P [auth n]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
Q [auth b]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
Q [auth b]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
Q [auth b]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
Q [auth b]IPR001865Small ribosomal subunit protein uS2Family
R [auth d]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
R [auth d]IPR002942RNA-binding S4 domainDomain
R [auth d]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
R [auth d]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
R [auth d]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
R [auth d]IPR022801Small ribosomal subunit protein uS4Family
B [auth c]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
B [auth c]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
B [auth c]IPR004087K Homology domainDomain
B [auth c]IPR004044K Homology domain, type 2Domain
B [auth c]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
B [auth c]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
B [auth c]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
B [auth c]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
T [auth m]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
T [auth m]IPR001892Small ribosomal subunit protein uS13Family
T [auth m]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
T [auth m]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
T [auth m]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
U [auth p]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
U [auth p]IPR000307Small ribosomal subunit protein bS16Family
U [auth p]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
V [auth u]IPR013177Ribosomal protein mS38, C-terminalDomain
C [auth e]IPR000851Small ribosomal subunit protein uS5Family
C [auth e]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
C [auth e]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
C [auth e]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
C [auth e]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
C [auth e]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
C [auth e]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
D [auth g]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
D [auth g]IPR000235Small ribosomal subunit protein uS7Family
D [auth g]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
D [auth g]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
D [auth g]IPR023798Small ribosomal subunit protein uS7 domainDomain
E [auth h]IPR000630Small ribosomal subunit protein uS8Family
E [auth h]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
E [auth h]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
F [auth i]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
F [auth i]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
F [auth i]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
F [auth i]IPR000754Small ribosomal subunit protein uS9Family
F [auth i]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
G [auth j]IPR001848Small ribosomal subunit protein uS10Family
G [auth j]IPR027486Small ribosomal subunit protein uS10 domainDomain
G [auth j]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
G [auth j]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
H [auth k]IPR001971Small ribosomal subunit protein uS11Family
H [auth k]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
H [auth k]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
H [auth k]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
I [auth l]IPR006032Small ribosomal subunit protein uS12Family
I [auth l]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
I [auth l]IPR005679Ribosomal protein uS12, bacterial-typeFamily