Crystal structure of C-terminal fragment of SpaD from Lactobacillus rhamnosus GG generated by limited proteolysis
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Collar,S_tail_recep_bd | e5yxgB1 | A: alpha arrays | X: L-aspartase middle domain-like | H: gp11/gp12 receptor-binding domain | T: gp11/gp12 receptor-binding domain | F: Collar,S_tail_recep_bd | ECOD (v295.2) |
| A | Collar,S_tail_recep_bd | e5yxgA1 | A: alpha arrays | X: L-aspartase middle domain-like | H: gp11/gp12 receptor-binding domain | T: gp11/gp12 receptor-binding domain | F: Collar,S_tail_recep_bd | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.60.40.740 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (utative) | |
| B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
| IPR026466 | Fimbrial isopeptide formation D2 domain | Domain | |
| IPR041033 | SpaA-like, prealbumin fold domain subgroup 1 | Domain | |
| IPR048052 | Fimbrial subunit type 1-like | Family | |
| IPR032364 | Gram-positive pilin subunit D1, N-terminal | Domain | |
| IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
| IPR026466 | Fimbrial isopeptide formation D2 domain | Domain | |
| IPR041033 | SpaA-like, prealbumin fold domain subgroup 1 | Domain | |
| IPR048052 | Fimbrial subunit type 1-like | Family | |
| IPR032364 | Gram-positive pilin subunit D1, N-terminal | Domain |
