Annotations: 5YS2

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	ATP-synt_VA_C	e5ys2F1	A: beta barrels	X: FAD-linked reductases, C-terminal domain-like	H: FAD-linked reductases-C	T: FAD-linked reductases-C	F: ATP-synt_VA_C	ECOD (v294.2)
E	ATP-synt_VA_C	e5ys2E1	A: beta barrels	X: FAD-linked reductases, C-terminal domain-like	H: FAD-linked reductases-C	T: FAD-linked reductases-C	F: ATP-synt_VA_C	ECOD (v294.2)
D	ATP-synt_VA_C	e5ys2D1	A: beta barrels	X: FAD-linked reductases, C-terminal domain-like	H: FAD-linked reductases-C	T: FAD-linked reductases-C	F: ATP-synt_VA_C	ECOD (v294.2)
C	Helicase_C	e5ys2C1	A: beta barrels	X: Protein kinase/SAICAR synthase/ATP-grasp	H: Protein kinase/SAICAR synthase/ATP-grasp	T: Undecaprenyl diphosphate synthase	F: Helicase_C	ECOD (v294.2)
B	ATP-synt_VA_C	e5ys2B1	A: beta barrels	X: FAD-linked reductases, C-terminal domain-like	H: FAD-linked reductases-C	T: FAD-linked reductases-C	F: ATP-synt_VA_C	ECOD (v294.2)
A	ATP-synt_VA_C	e5ys2A1	A: beta barrels	X: FAD-linked reductases, C-terminal domain-like	H: FAD-linked reductases-C	T: FAD-linked reductases-C	F: ATP-synt_VA_C	ECOD (v294.2)

Chain	Domain	Class	Architecture	Topology	Provenance Source (Version)
F	2.30.30.1230	Mainly Beta	Roll	SH3 type barrels.	CATH (4.3.0)
E	2.30.30.1230	Mainly Beta	Roll	SH3 type barrels.	CATH (4.3.0)
D	2.30.30.1230	Mainly Beta	Roll	SH3 type barrels.	CATH (4.3.0)
C	2.30.30.1230	Mainly Beta	Roll	SH3 type barrels.	CATH (4.3.0)
B	2.30.30.1230	Mainly Beta	Roll	SH3 type barrels.	CATH (4.3.0)
A	2.30.30.1230	Mainly Beta	Roll	SH3 type barrels.	CATH (4.3.0)

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Envelope glycoprotein B,Envelope glycoprotein B	-	virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host	virion component viral membrane viral envelope

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR000234	Herpesvirus Glycoprotein B	Family
A, B, C, D, E A, B, C, D, E, F	IPR035381	Herpesvirus Glycoprotein B, PH-like domain 2	Domain
A, B, C, D, E A, B, C, D, E, F	IPR035377	Herpesvirus Glycoprotein B, PH-like domain 1	Domain
A, B, C, D, E A, B, C, D, E, F	IPR055341	Herpesvirus glycoprotein B ectodomain C-terminal	Domain
A, B, C, D, E A, B, C, D, E, F	IPR038631	Herpesvirus Glycoprotein B, PH-like domain 2 superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

5YS2 | pdb_00005ys2