5YPI
Crystal structure of NDM-1 bound to hydrolyzed imipenem representing an EI1 complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8061885 | 3001057 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8061885 | 3001057 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8061885 | 3001057 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8061885 | 3001057 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8061885 | 3001057 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8061885 | 3001057 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8061885 | 3001057 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Metallo-hydrolase/oxidoreductase | 8061885 | 3001057 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Lactamase_B | e5ypiB1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
C | Lactamase_B | e5ypiC1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
D | Lactamase_B | e5ypiD1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
E | Lactamase_B | e5ypiE1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
F | Lactamase_B | e5ypiF1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
G | Lactamase_B | e5ypiG1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
H | Lactamase_B | e5ypiH1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
A | Lactamase_B | e5ypiA1 | A: a+b four layers | X: Metallo-hydrolase/oxidoreductase (From Topology) | H: Metallo-hydrolase/oxidoreductase (From Topology) | T: Metallo-hydrolase/oxidoreductase | F: Lactamase_B | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
C | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
D | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
E | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
F | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
G | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
H | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
A | 3.60.15.10 | Alpha Beta | 4-Layer Sandwich | Metallo-beta-lactamase | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Metallo-beta-lactamase NDM-1 | - |