5YJC

Structural insights into the CRISPR-Cas-associated ribonuclease activity of Staphylococcus epidermidis Csm6


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF09659e5yjcA1 A: alpha bundlesX: Four-helical up-and-down bundleH: HEPNT: Nucleotidyltransferase substrate binding subunit/domainF: PF09659ECOD (1.6)
APF22206e5yjcA2 A: alpha bundlesX: CRISPR/Cas system-associated protein Csm6 6H domain (From Topology)H: CRISPR/Cas system-associated protein Csm6 6H domain (From Topology)T: CRISPR/Cas system-associated protein Csm6 6H domainF: PF22206ECOD (1.6)
BPF09659e5yjcB1 A: alpha bundlesX: Four-helical up-and-down bundleH: HEPNT: Nucleotidyltransferase substrate binding subunit/domainF: PF09659ECOD (1.6)
BPF22206e5yjcB2 A: alpha bundlesX: CRISPR/Cas system-associated protein Csm6 6H domain (From Topology)H: CRISPR/Cas system-associated protein Csm6 6H domain (From Topology)T: CRISPR/Cas system-associated protein Csm6 6H domainF: PF22206ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF09659Cas_Csm6 HEPN domain (Cas_Csm6_HEPN)Cas_Csm6 HEPN domainThis entry represents the HEPN domain of Csm6 from bacteria (i.e Enterococcus italicus), a Cas (CRISPR-associated) protein from type III-A CRISPR-Cas system. It consists of a CARF domain at the N-terminal, a six-helix domain and a C-terminal HEPN dom ...This entry represents the HEPN domain of Csm6 from bacteria (i.e Enterococcus italicus), a Cas (CRISPR-associated) protein from type III-A CRISPR-Cas system. It consists of a CARF domain at the N-terminal, a six-helix domain and a C-terminal HEPN domain at the C-terminal, which has RNase activity [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR013489CRISPR-associated protein Csm6Family