5YHI
Crystal structure of YiiM from Escherichia coli
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5yhia1 | All beta proteins | PK beta-barrel domain-like | PK beta-barrel domain-like | MOSC (MOCO sulphurase C-terminal) domain | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
A | d5yhia2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
B | d5yhib1 | All beta proteins | PK beta-barrel domain-like | PK beta-barrel domain-like | MOSC (MOCO sulphurase C-terminal) domain | automated matches | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
B | d5yhib2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF03473,PF03475 | e5yhiA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PK beta-barrel domain-like | F: PF03473,PF03475 | ECOD (1.6) |
B | PF03473,PF03475 | e5yhiB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: PK beta-barrel domain-like | F: PF03473,PF03475 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.33.20 | Mainly Beta | Beta Barrel | M1 Pyruvate Kinase | Domain 3 | CATH (4.3.0) |
B | 2.40.33.20 | Mainly Beta | Beta Barrel | M1 Pyruvate Kinase | Domain 3 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03475 | YiiM-like, 3-alpha helix domain (YiiM_3-alpha) | YiiM-like, 3-alpha helix domain | This small triple helical domain has been predicted to assume a topology similar to helix-turn-helix domains. These domains are found at the C-terminus of proteins related to Swiss:P32157 [1,2]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011037 | Pyruvate kinase-like, insert domain superfamily | Homologous Superfamily | |
IPR052353 | Benzoxazolinone Detoxification Enzymes | Family | |
IPR005163 | YiiM-like, 3-alpha helix domain | Domain | |
IPR005302 | Molybdenum cofactor sulfurase, C-terminal | Domain |