5YEJ
Crystal structure of BioQ with its naturel double-stranded DNA operator
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00440 | e5yejA1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00440 | ECOD (1.6) |
A | PF02909 | e5yejA2 | A: alpha bundles | X: Tetracyclin repressor-like, C-terminal domain (From Topology) | H: Tetracyclin repressor-like, C-terminal domain (From Topology) | T: Tetracyclin repressor-like, C-terminal domain | F: PF02909 | ECOD (1.6) |
B | PF00440 | e5yejB1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00440 | ECOD (1.6) |
B | PF02909 | e5yejB2 | A: alpha bundles | X: Tetracyclin repressor-like, C-terminal domain (From Topology) | H: Tetracyclin repressor-like, C-terminal domain (From Topology) | T: Tetracyclin repressor-like, C-terminal domain | F: PF02909 | ECOD (1.6) |
F [auth C] | PF00440 | e5yejC1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF00440 | ECOD (1.6) |
F [auth C] | PF02909 | e5yejC2 | A: alpha bundles | X: Tetracyclin repressor-like, C-terminal domain (From Topology) | H: Tetracyclin repressor-like, C-terminal domain (From Topology) | T: Tetracyclin repressor-like, C-terminal domain | F: PF02909 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B, F [auth C] | PF00440 | Bacterial regulatory proteins, tetR family (TetR_N) | Bacterial regulatory proteins, tetR family | - | Domain |
A, B, F [auth C] | PF02909 | Tetracyclin repressor-like, C-terminal domain (TetR_C_1) | Tetracyclin repressor-like, C-terminal domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B, F [auth C] | IPR023772 | DNA-binding HTH domain, TetR-type, conserved site | Conserved Site |
A, B, F [auth C] | IPR009057 | Homedomain-like superfamily | Homologous Superfamily |
A, B, F [auth C] | IPR050109 | HTH-type transcriptional regulators | Family |
A, B, F [auth C] | IPR003012 | Tetracycline transcriptional regulator, TetR | Family |
A, B, F [auth C] | IPR001647 | DNA-binding HTH domain, TetR-type | Domain |
A, B, F [auth C] | IPR036271 | Tetracyclin repressor-like, C-terminal domain superfamily | Homologous Superfamily |
A, B, F [auth C] | IPR004111 | Tetracycline repressor TetR, C-terminal | Domain |