5Y9R
Crystal structure of the oligomerization domain of NSP4 from rotavirus strain MF66
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5y9ra_ | Coiled coil proteins | Parallel coiled-coil | Rotavirus nonstructural proteins | NSP4 oligomerization domain | automated matches | (Bovine rotavirus G10 ) [TaxId: 195477 ], | SCOPe (2.08) |
B | d5y9rb_ | Coiled coil proteins | Parallel coiled-coil | Rotavirus nonstructural proteins | NSP4 oligomerization domain | automated matches | (Bovine rotavirus G10 ) [TaxId: 195477 ], | SCOPe (2.08) |
C [auth D] | d5y9rd_ | Coiled coil proteins | Parallel coiled-coil | Rotavirus nonstructural proteins | NSP4 oligomerization domain | automated matches | (Bovine rotavirus G10 ) [TaxId: 195477 ], | SCOPe (2.08) |
D [auth C] | d5y9rc1 | Coiled coil proteins | Parallel coiled-coil | Rotavirus nonstructural proteins | NSP4 oligomerization domain | automated matches | (Bovine rotavirus G10 ) [TaxId: 195477 ], | SCOPe (2.08) |
D [auth C] | d5y9rc2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Bovine rotavirus G10 ) [TaxId: 195477 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Rotavirus nonstructural proteins | 8072077 | 3001522 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Rotavirus nonstructural proteins | 8072077 | 3001522 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2 Family | NSP4 oligomerization domain | 8072076 | 4003803 | SCOP2 (2022-06-29) |
C [auth D] | SCOP2 Superfamily | Rotavirus nonstructural proteins | 8072077 | 3001522 | SCOP2 (2022-06-29) |
D [auth C] | SCOP2B Superfamily | Rotavirus nonstructural proteins | 8072077 | 3001522 | SCOP2B (2022-06-29) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.5.430 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
B | 1.20.5.430 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
C [auth D] | 1.20.5.430 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
D [auth C] | 1.20.5.430 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B, C [auth D], D [auth C] | IPR002107 | Rotavirus non-structural protein 4 | Family |