Annotations: 5Y28

Crystal structure of H. pylori HtrA with PDZ2 deletion

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2 Family	Prokaryotic proteases	8089445	4002151	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Trypsin-like serine proteases	8089446	3000114	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	PK_Tyr_Ser-Thr	e5y28C1	A: alpha arrays	X: Major facilitator superfamily (MFS) general substrate transporter	H: Major facilitator superfamily (MFS) general substrate transporter	T: Major facilitator superfamily (MFS) general substrate transporter	F: PK_Tyr_Ser-Thr	ECOD (v295.2)
B	Collar,S_tail_recep_bd	e5y28B1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: Collar,S_tail_recep_bd	ECOD (v295.2)
A	Collar,S_tail_recep_bd	e5y28A1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: Collar,S_tail_recep_bd	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.40.10.120	Mainly Beta	Beta Barrel	Thrombin, subunit H		CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D [auth G]	UNK-UNK-UNK-UNK	-	-	-
A, B, C	Periplasmic serine endoprotease DegP-like	identical protein binding protein binding binding protein homodimerization activity protein dimerization activity peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity serine hydrolase activity serine-type peptidase activity serine-type endopeptidase activity endopeptidase activity	proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process	cellular anatomical structure extracellular region cell periphery plasma membrane membrane intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR011782	Peptidase S1C, Do-like	Family
A, B, C	IPR009003	Peptidase S1, PA clan	Homologous Superfamily
A, B, C	IPR001940	Peptidase S1C	Family
A, B, C	IPR036034	PDZ superfamily	Homologous Superfamily
A, B, C	IPR051201	Chloroplastic and Bacterial Serine Proteases	Family
A, B, C	IPR001478	PDZ domain	Domain