5XQP
Crystal structure of Notched-fin eelpout type III antifreeze protein (NFE6, AFP), P212121 form
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5xqpa_ | All beta proteins | beta-clip | AFP III-like domain | AFP III-like domain | automated matches | (Zoarces elongatus ) [TaxId: 291231 ], | SCOPe (2.08) |
B | d5xqpb_ | All beta proteins | beta-clip | AFP III-like domain | AFP III-like domain | automated matches | (Zoarces elongatus ) [TaxId: 291231 ], | SCOPe (2.08) |
C | d5xqpc_ | All beta proteins | beta-clip | AFP III-like domain | AFP III-like domain | automated matches | (Zoarces elongatus ) [TaxId: 291231 ], | SCOPe (2.08) |
D | d5xqpd_ | All beta proteins | beta-clip | AFP III-like domain | AFP III-like domain | automated matches | (Zoarces elongatus ) [TaxId: 291231 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | AFP III-like domain | 8078243 | 4002954 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | AFP III-like domain | 8078244 | 3001936 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | AFP III-like domain | 8078244 | 3001936 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | AFP III-like domain | 8078244 | 3001936 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | AFP III-like domain | 8078244 | 3001936 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SAF_1 | e5xqpA1 | A: beta barrels | X: beta-clip | H: SET domain-like (From Topology) | T: SET domain-like | F: SAF_1 | ECOD (1.6) |
B | SAF_1 | e5xqpB1 | A: beta barrels | X: beta-clip | H: SET domain-like (From Topology) | T: SET domain-like | F: SAF_1 | ECOD (1.6) |
C | SAF_1 | e5xqpC1 | A: beta barrels | X: beta-clip | H: SET domain-like (From Topology) | T: SET domain-like | F: SAF_1 | ECOD (1.6) |
D | SAF_1 | e5xqpD1 | A: beta barrels | X: beta-clip | H: SET domain-like (From Topology) | T: SET domain-like | F: SAF_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.1210.10 | Alpha Beta | Alpha-Beta Complex | Type Iii Antifreeze Protein Isoform Hplc 12 | Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain | CATH (4.3.0) |
B | 3.90.1210.10 | Alpha Beta | Alpha-Beta Complex | Type Iii Antifreeze Protein Isoform Hplc 12 | Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain | CATH (4.3.0) |
C | 3.90.1210.10 | Alpha Beta | Alpha-Beta Complex | Type Iii Antifreeze Protein Isoform Hplc 12 | Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain | CATH (4.3.0) |
D | 3.90.1210.10 | Alpha Beta | Alpha-Beta Complex | Type Iii Antifreeze Protein Isoform Hplc 12 | Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Ice-structuring protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006190 | Antifreeze-like/N-acetylneuraminic acid synthase C-terminal | Domain | |
IPR036732 | Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily | Homologous Superfamily | |
IPR013974 | SAF domain | Domain | |
IPR006013 | Antifreeze, type III | Family |