Crystal structure of Trastuzumab Fab fragment bearing p-azido-L-phenylalanine


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CKu_Ne5xhfC1 A: beta barrelsX: Protein kinase/SAICAR synthase/ATP-graspH: Protein kinase/SAICAR synthase/ATP-graspT: Undecaprenyl diphosphate synthaseF: Ku_NECOD (v294.2)
AATP-synt_VA_Ce5xhfA1 A: beta barrelsX: FAD-linked reductases, C-terminal domain-likeH: FAD-linked reductases-CT: FAD-linked reductases-CF: ATP-synt_VA_CECOD (v294.2)
DATP-synt_VA_Ce5xhfD1 A: beta barrelsX: FAD-linked reductases, C-terminal domain-likeH: FAD-linked reductases-CT: FAD-linked reductases-CF: ATP-synt_VA_CECOD (v294.2)
BKu_Ne5xhfB1 A: beta barrelsX: Protein kinase/SAICAR synthase/ATP-graspH: Protein kinase/SAICAR synthase/ATP-graspT: Undecaprenyl diphosphate synthaseF: Ku_NECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
D2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A, C
Light ChainIGKV1 Kappa-SAbDab (2026-05-08)
B, D
Heavy ChainIGHV3 --SAbDab (2026-05-08)

Thera-SAbDab Antibody Annotation Thera-SAbDab Database Homepage

ChainNameTargetProvenance Source
A, C
Coprelotamab ERBB2/CD340/HER2, CD3E, TNFRSF9/CD137/4-1BB, SIRPATherapeutic SAbDab (2026-05-08)
B, D
Coprelotamab ERBB2/CD340/HER2, TNFRSF9/CD137/4-1BB, SIRPA, CD3ETherapeutic SAbDab (2026-05-08)