5WVU
Crystal structure of carboxypeptidase from Thermus thermophilus
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5wvua_ | Alpha and beta proteins (a+b) | Zincin-like | Metalloproteases ('zincins'), catalytic domain | automated matches | automated matches | (Thermus thermophilus HB8 ) [TaxId: 300852 ], | SCOPe (2.08) |
B | d5wvub_ | Alpha and beta proteins (a+b) | Zincin-like | Metalloproteases ('zincins'), catalytic domain | automated matches | automated matches | (Thermus thermophilus HB8 ) [TaxId: 300852 ], | SCOPe (2.08) |
C | d5wvuc_ | Alpha and beta proteins (a+b) | Zincin-like | Metalloproteases ('zincins'), catalytic domain | automated matches | automated matches | (Thermus thermophilus HB8 ) [TaxId: 300852 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Neurolysin-like | 8087486 | 4001613 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Metalloproteases (zincins), catalytic domain | 8087487 | 3001975 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Metalloproteases (zincins), catalytic domain | 8087487 | 3001975 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Metalloproteases (zincins), catalytic domain | 8087487 | 3001975 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Peptidase_M3 | e5wvuA1 | A: mixed a+b and a/b | X: Zincin-like | H: Metalloproteases (zincins) catalytic domain (From Topology) | T: Metalloproteases (zincins) catalytic domain | F: Peptidase_M3 | ECOD (1.6) |
B | Peptidase_M3 | e5wvuB1 | A: mixed a+b and a/b | X: Zincin-like | H: Metalloproteases (zincins) catalytic domain (From Topology) | T: Metalloproteases (zincins) catalytic domain | F: Peptidase_M3 | ECOD (1.6) |
C | Peptidase_M3 | e5wvuC1 | A: mixed a+b and a/b | X: Zincin-like | H: Metalloproteases (zincins) catalytic domain (From Topology) | T: Metalloproteases (zincins) catalytic domain | F: Peptidase_M3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.1370.30 | Mainly Alpha | Orthogonal Bundle | Neurolysin | domain 3 | CATH (4.3.0) |
B | 1.10.1370.30 | Mainly Alpha | Orthogonal Bundle | Neurolysin | domain 3 | CATH (4.3.0) |
C | 1.10.1370.30 | Mainly Alpha | Orthogonal Bundle | Neurolysin | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02074 | Carboxypeptidase Taq (M32) metallopeptidase (Peptidase_M32) | Carboxypeptidase Taq (M32) metallopeptidase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001333 | Peptidase M32, carboxypeptidase Taq | Family |