5WTB
Complex Structure of Staphylococcus aureus SdrE with human complement factor H
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | PF10425 | e5wtbD2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF10425 | ECOD (1.6) |
A [auth D] | PF17961 | e5wtbD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF17961 | ECOD (1.6) |
B [auth A] | PF10425 | e5wtbA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF10425 | ECOD (1.6) |
B [auth A] | PF17961 | e5wtbA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF17961 | ECOD (1.6) |
C [auth B] | PF10425 | e5wtbB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF10425 | ECOD (1.6) |
C [auth B] | PF17961 | e5wtbB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF17961 | ECOD (1.6) |
D [auth C] | PF10425 | e5wtbC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF10425 | ECOD (1.6) |
D [auth C] | PF17961 | e5wtbC2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF17961 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth D] | 2.60.40.1280 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
A [auth D] | 2.60.40.1290 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
B [auth A] | 2.60.40.1280 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
B [auth A] | 2.60.40.1290 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
C [auth B] | 2.60.40.1280 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
C [auth B] | 2.60.40.1290 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
D [auth C] | 2.60.40.1280 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
D [auth C] | 2.60.40.1290 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth D], B [auth A], C [auth B], D [auth C] | PF17961 | Bacterial Ig domain (Big_8) | Bacterial Ig domain | This entry represents a bacterial Ig-fold domain that is found in a wide range of bacterial cell surface adherence proteins. | Domain |
A [auth D], B [auth A], C [auth B], D [auth C] | PF10425 | C-terminus of bacterial fibrinogen-binding adhesin (SdrG_C_C) | C-terminus of bacterial fibrinogen-binding adhesin | This is the C-terminal half of a bacterial fibrinogen-binding adhesin SdrG. SdrG is a Gram-positive cell-wall-anchored adhesin that allows attachment of the bacterium to host tissues via specific binding to the beta-chain of human fibrinogen (Fg). Sd ... | Domain |
PF00084 | Sushi repeat (SCR repeat) (Sushi) | Sushi repeat (SCR repeat) | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth D], B [auth A], C [auth B], D [auth C] | IPR033764 | SD-repeat containing protein, B domain | Domain |
A [auth D], B [auth A], C [auth B], D [auth C] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
A [auth D], B [auth A], C [auth B], D [auth C] | IPR005877 | YSIRK Gram-positive signal peptide | Domain |
A [auth D], B [auth A], C [auth B], D [auth C] | IPR008966 | Adhesion domain superfamily | Homologous Superfamily |
A [auth D], B [auth A], C [auth B], D [auth C] | IPR011252 | Fibrogen-binding domain 1 | Homologous Superfamily |
A [auth D], B [auth A], C [auth B], D [auth C] | IPR011266 | Fibrinogen-binding domain 2 | Domain |
A [auth D], B [auth A], C [auth B], D [auth C] | IPR019931 | LPXTG cell wall anchor domain | Domain |
A [auth D], B [auth A], C [auth B], D [auth C] | IPR041171 | SDR-like Ig domain | Domain |
IPR000436 | Sushi/SCR/CCP domain | Domain | |
IPR035976 | Sushi/SCR/CCP superfamily | Homologous Superfamily |