5WMM
Crystal structure of an adenylation domain interrupted by a methylation domain (AMA4) from nonribosomal peptide synthetase TioS
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d5wmmb_ | Alpha and beta proteins (a+b) | MbtH/L9 domain-like | MbtH-like | automated matches | automated matches | (Micromonospora sp. ML1 ) [TaxId: 349725 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | AMP-binding_C | e5wmmA4 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: a+b domain in acetyl-CoA synthetase-like proteins (From Topology) | T: a+b domain in acetyl-CoA synthetase-like proteins | F: AMP-binding_C | ECOD (1.6) |
A | AMP-binding_1st,AMP-binding_2nd | e5wmmA2 | A: a+b complex topology | X: CoA-dependent acyltransferases (From Topology) | H: CoA-dependent acyltransferases (From Topology) | T: CoA-dependent acyltransferases | F: AMP-binding_1st,AMP-binding_2nd | ECOD (1.6) |
A | AMP-binding_2nd,AMP-binding_3rd,AMP-binding_C | e5wmmA1 | A: a+b complex topology | X: CoA-dependent acyltransferases (From Topology) | H: CoA-dependent acyltransferases (From Topology) | T: CoA-dependent acyltransferases | F: AMP-binding_2nd,AMP-binding_3rd,AMP-binding_C | ECOD (1.6) |
A | Methyltransf_11_3 | e5wmmA3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: Methyltransf_11_3 | ECOD (1.6) |
B | MbtH | e5wmmB1 | A: a+b two layers | X: L9 N-domain-like | H: MbtH-like (From Topology) | T: MbtH-like | F: MbtH | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.90.820.10 | Alpha Beta | Alpha-Beta Complex | Rubredoxin-like | Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00501 | AMP-binding enzyme (AMP-binding) | AMP-binding enzyme | - | Family | |
PF08242 | Methyltransferase domain (Methyltransf_12) | Methyltransferase domain | Members of this family are SAM dependent methyltransferases. | Domain | |
PF03621 | MbtH-like protein (MbtH) | MbtH-like protein | This domain is found in the MbtH protein Swiss:O05821 as well as at the N terminus of the antibiotic synthesis protein NIKP1. MbtH and its homologues were first noted in gene clusters involved in non-ribosomal peptides and other secondary metabolites ... | Domain |