5WJT | pdb_00005wjt

Cryo-EM structure of B. subtilis flagellar filaments N226Y


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ZAnoctamin,Anoct_dimere5wjtZ1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
YAnoctamin,Anoct_dimere5wjtY1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
XAnoctamin,Anoct_dimere5wjtX1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
WAnoctamin,Anoct_dimere5wjtW1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
VAnoctamin,Anoct_dimere5wjtV1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
UAnoctamin,Anoct_dimere5wjtU1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
TAnoctamin,Anoct_dimere5wjtT1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
SAnoctamin,Anoct_dimere5wjtS1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
RAnoctamin,Anoct_dimere5wjtR1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
QAnoctamin,Anoct_dimere5wjtQ1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
PAnoctamin,Anoct_dimere5wjtP1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
OA [auth o]Anoctamin,Anoct_dimere5wjto1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
OAnoctamin,Anoct_dimere5wjtO1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
NA [auth n]Anoctamin,Anoct_dimere5wjtn1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
NAnoctamin,Anoct_dimere5wjtN1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
MA [auth m]Anoctamin,Anoct_dimere5wjtm1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
MAnoctamin,Anoct_dimere5wjtM1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
LA [auth l]Anoctamin,Anoct_dimere5wjtl1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
LAnoctamin,Anoct_dimere5wjtL1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
KA [auth k]Anoctamin,Anoct_dimere5wjtk1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
KAnoctamin,Anoct_dimere5wjtK1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
JA [auth j]Anoctamin,Anoct_dimere5wjtj1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
JAnoctamin,Anoct_dimere5wjtJ1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
IA [auth i]Anoctamin,Anoct_dimere5wjti1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
IAnoctamin,Anoct_dimere5wjtI1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
HA [auth h]Anoctamin,Anoct_dimere5wjth1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
HAnoctamin,Anoct_dimere5wjtH1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
GA [auth g]Anoctamin,Anoct_dimere5wjtg1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
GAnoctamin,Anoct_dimere5wjtG1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
FA [auth f]Anoctamin,Anoct_dimere5wjtf1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
FAnoctamin,Anoct_dimere5wjtF1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
EA [auth e]Anoctamin,Anoct_dimere5wjte1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
EAnoctamin,Anoct_dimere5wjtE1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
DA [auth d]Anoctamin,Anoct_dimere5wjtd1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
DAnoctamin,Anoct_dimere5wjtD1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
CA [auth c]Anoctamin,Anoct_dimere5wjtc1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
CAnoctamin,Anoct_dimere5wjtC1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
BA [auth b]Anoctamin,Anoct_dimere5wjtb1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
BAnoctamin,Anoct_dimere5wjtB1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
AA [auth a]Anoctamin,Anoct_dimere5wjta1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)
AAnoctamin,Anoct_dimere5wjtA1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Anoctamin,Anoct_dimerECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
Z1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
Y1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
X1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
W1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
V1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
U1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
T1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
S1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
R1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
Q1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
P1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
OA [auth o]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
O1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
NA [auth n]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
N1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
MA [auth m]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
M1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
LA [auth l]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
L1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
KA [auth k]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
K1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
JA [auth j]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
J1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
IA [auth i]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
I1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
HA [auth h]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
H1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
GA [auth g]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
G1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
FA [auth f]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
F1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
EA [auth e]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
E1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
DA [auth d]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
D1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
CA [auth c]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
C1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
BA [auth b]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
B1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
AA [auth a]1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)
A1.20.1330.10 Mainly Alpha Up-down Bundle f41 fragment of flagellin, N-terminal domain f41 fragment of flagellin, N-terminal domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00700Bacterial flagellin C-terminal helical region (Flagellin_C)Bacterial flagellin C-terminal helical regionFlagellins polymerise to form bacterial flagella. There is some similarity between this entry and Pfam:PF00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate [2] and this is shown to be correct as structur ...Flagellins polymerise to form bacterial flagella. There is some similarity between this entry and Pfam:PF00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate [2] and this is shown to be correct as structurally this domain forms an extended helix that interacts with the N-terminal region (Pfam:PF00669) to form the D0 and D1 structural domains [3]. These domains are responsible for the activation of TLR5, with the C-terminal D0 region playing a key role [4-6].
Domain
PF00669Bacterial flagellin N-terminal helical region (Flagellin_N)Bacterial flagellin N-terminal helical region- Family