Annotations: 5W6J

Agrobacterium tumefaciens ADP-glucose pyrophosphorylase

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
T [auth U]	Tyrosinase	e5w6jU1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
S [auth T]	Tyrosinase	e5w6jT1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
R [auth M]	Tyrosinase	e5w6jM1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
Q [auth G]	Tyrosinase	e5w6jG1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
P [auth F]	Tyrosinase	e5w6jF1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
O [auth R]	Tyrosinase	e5w6jR1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
N [auth Q]	Tyrosinase	e5w6jQ1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
M [auth P]	Tyrosinase	e5w6jP1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
L [auth O]	Tyrosinase	e5w6jO1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
K [auth N]	Tyrosinase	e5w6jN1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
J [auth L]	Tyrosinase	e5w6jL1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
I [auth K]	Tyrosinase	e5w6jK1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
H [auth J]	Tyrosinase	e5w6jJ1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
G [auth I]	Tyrosinase	e5w6jI1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
F [auth H]	Tyrosinase	e5w6jH1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
E	Tyrosinase	e5w6jE1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
D	Tyrosinase	e5w6jD1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
C	Tyrosinase	e5w6jC1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
B	Tyrosinase	e5w6jB1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)
A	Tyrosinase	e5w6jA1	A: beta barrels	X: N-cbl like	H: HTH	T: SH3	F: Tyrosinase	ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
T [auth U]	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
T [auth U]	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
S [auth T]	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
S [auth T]	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
R [auth M]	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
R [auth M]	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
Q [auth G]	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
Q [auth G]	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
P [auth F]	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
P [auth F]	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
O [auth R]	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
O [auth R]	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
N [auth Q]	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
N [auth Q]	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
M [auth P]	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
M [auth P]	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
L [auth O]	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
L [auth O]	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
K [auth N]	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
K [auth N]	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
J [auth L]	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
J [auth L]	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
I [auth K]	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
I [auth K]	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
H [auth J]	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
H [auth J]	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
G [auth I]	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
G [auth I]	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
F [auth H]	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
F [auth H]	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
E	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
E	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
D	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
D	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
C	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
C	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
B	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
B	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)
A	3.90.550.10	Alpha Beta	Alpha-Beta Complex	Spore Coat Polysaccharide Biosynthesis Protein SpsA	Chain A	CATH (utative)
A	2.160.10.10	Mainly Beta	3 Solenoid	UDP N-Acetylglucosamine Acyltransferase	domain 1	CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E, A, B, C, D, E, F [auth H], G [auth I], H [auth J], I [auth K], J [auth L], K [auth N], L [auth O], M [auth P], N [auth Q], O [auth R], P [auth F], Q [auth G], R [auth M], S [auth T], T [auth U]	Glucose-1-phosphate adenylyltransferase	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding adenylyltransferase activity glucose-1-phosphate adenylyltransferase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups	carbohydrate metabolic process glucan biosynthetic process polysaccharide biosynthetic process energy derivation by oxidation of organic compounds carbohydrate biosynthetic process glycogen metabolic process primary metabolic process generation of precursor metabolites and energy glycogen biosynthetic process macromolecule biosynthetic process polysaccharide metabolic process glucan metabolic process biosynthetic process metabolic process carbohydrate metabolic process glucan biosynthetic process polysaccharide biosynthetic process energy derivation by oxidation of organic compounds carbohydrate biosynthetic process glycogen metabolic process primary metabolic process generation of precursor metabolites and energy glycogen biosynthetic process macromolecule biosynthetic process polysaccharide metabolic process glucan metabolic process biosynthetic process metabolic process cellular process energy reserve metabolic process macromolecule metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E, A, B, C, D, E, F [auth H], G [auth I], H [auth J], I [auth K], J [auth L], K [auth N], L [auth O], M [auth P], N [auth Q], O [auth R], P [auth F], Q [auth G], R [auth M], S [auth T], T [auth U]	IPR056818	Glucose-1-phosphate adenylyltransferase/Bifunctional protein GlmU-like, C-terminal hexapeptide	Domain
A, B, C, D, E, A, B, C, D, E, F [auth H], G [auth I], H [auth J], I [auth K], J [auth L], K [auth N], L [auth O], M [auth P], N [auth Q], O [auth R], P [auth F], Q [auth G], R [auth M], S [auth T], T [auth U]	IPR011831	Glucose-1-phosphate adenylyltransferase	Family
A, B, C, D, E, A, B, C, D, E, F [auth H], G [auth I], H [auth J], I [auth K], J [auth L], K [auth N], L [auth O], M [auth P], N [auth Q], O [auth R], P [auth F], Q [auth G], R [auth M], S [auth T], T [auth U]	IPR005836	ADP-glucose pyrophosphorylase, conserved site	Conserved Site
A, B, C, D, E, A, B, C, D, E, F [auth H], G [auth I], H [auth J], I [auth K], J [auth L], K [auth N], L [auth O], M [auth P], N [auth Q], O [auth R], P [auth F], Q [auth G], R [auth M], S [auth T], T [auth U]	IPR023049	Glucose-1-phosphate adenylyltransferase GlgC, bacterial	Family
A, B, C, D, E, A, B, C, D, E, F [auth H], G [auth I], H [auth J], I [auth K], J [auth L], K [auth N], L [auth O], M [auth P], N [auth Q], O [auth R], P [auth F], Q [auth G], R [auth M], S [auth T], T [auth U]	IPR011004	Trimeric LpxA-like superfamily	Homologous Superfamily
A, B, C, D, E, A, B, C, D, E, F [auth H], G [auth I], H [auth J], I [auth K], J [auth L], K [auth N], L [auth O], M [auth P], N [auth Q], O [auth R], P [auth F], Q [auth G], R [auth M], S [auth T], T [auth U]	IPR005835	Nucleotidyl transferase domain	Domain
A, B, C, D, E, A, B, C, D, E, F [auth H], G [auth I], H [auth J], I [auth K], J [auth L], K [auth N], L [auth O], M [auth P], N [auth Q], O [auth R], P [auth F], Q [auth G], R [auth M], S [auth T], T [auth U]	IPR029044	Nucleotide-diphospho-sugar transferases	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

5W6J | pdb_00005w6j

Agrobacterium tumefaciens ADP-glucose pyrophosphorylase

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Domain Annotation: CATH CATH Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage