5W4T
Crystal Structure of Fish Cadherin-23 EC1-3
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth C] | SCOP2B Superfamily | Cadherin-like | 8092024 | 3002049 | SCOP2B (2022-06-29) |
A [auth C] | SCOP2B Superfamily | Cadherin-like | 8092023 | 3002049 | SCOP2B (2022-06-29) |
A [auth C] | SCOP2B Superfamily | Cadherin-like | 8092025 | 3002049 | SCOP2B (2022-06-29) |
B [auth A] | SCOP2 Family | Cadherin | 8088104 | 4007535 | SCOP2 (2022-06-29) |
B [auth A] | SCOP2 Family | Cadherin | 8092021 | 4007535 | SCOP2 (2022-06-29) |
B [auth A] | SCOP2 Family | Cadherin | 8092022 | 4007535 | SCOP2 (2022-06-29) |
B [auth A] | SCOP2 Superfamily | Cadherin-like | 8092023 | 3002049 | SCOP2 (2022-06-29) |
B [auth A] | SCOP2 Superfamily | Cadherin-like | 8092024 | 3002049 | SCOP2 (2022-06-29) |
B [auth A] | SCOP2 Superfamily | Cadherin-like | 8092025 | 3002049 | SCOP2 (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Cadherin-like | 8092025 | 3002049 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Cadherin-like | 8092023 | 3002049 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Cadherin-like | 8092024 | 3002049 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Cadherin-like | 8092025 | 3002049 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Cadherin-like | 8092024 | 3002049 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Cadherin-like | 8092023 | 3002049 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | Cadherin | e5w4tC2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Cadherin | ECOD (1.6) |
B [auth A] | Cadherin | e5w4tA3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Cadherin | ECOD (1.6) |
C [auth B] | Cadherin | e5w4tB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Cadherin | ECOD (1.6) |
D | Cadherin | e5w4tD3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Cadherin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth C] | 2.60.40.60 | Mainly Beta | Sandwich | Immunoglobulin-like | Cadherins | CATH (utative) |
B [auth A] | 2.60.40.60 | Mainly Beta | Sandwich | Immunoglobulin-like | Cadherins | CATH (utative) |
C [auth B] | 2.60.40.60 | Mainly Beta | Sandwich | Immunoglobulin-like | Cadherins | CATH (utative) |
D | 2.60.40.60 | Mainly Beta | Sandwich | Immunoglobulin-like | Cadherins | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C], B [auth A], C [auth B], D | PF00028 | Cadherin domain (Cadherin) | Cadherin domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth C], B [auth A], C [auth B], D | IPR015919 | Cadherin-like superfamily | Homologous Superfamily |
A [auth C], B [auth A], C [auth B], D | IPR020894 | Cadherin conserved site | Conserved Site |
A [auth C], B [auth A], C [auth B], D | IPR002126 | Cadherin-like | Domain |